Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRAF3IP1Q8TDR0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.22□□□□□ -1.41
TRAF3IP1Q8TDR0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.22□□□□□ -1.41
TRAF3IP1Q8TDR0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRAF3IP1Q8TDR0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.22□□□□□ -1.41
TRAF3IP1Q8TDR0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.22□□□□□ -1.41
TRAF3IP1Q8TDR0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.22□□□□□ -1.41
TRAF3IP1Q8TDR0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
TRAF3IP1Q8TDR0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
TRAF3IP1Q8TDR0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRAF3IP1Q8TDR0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRAF3IP1Q8TDR0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 YWHAZP6-201ENST00000399764 738 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 SNRPEP6-201ENST00000407465 277 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 RN7SKP108-201ENST00000411367 328 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC013268.2-201ENST00000420753 337 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 RN7SL836P-201ENST00000476140 296 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC079080.1-201ENST00000479841 822 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AP003033.2-201ENST00000528901 805 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC244502.2-201ENST00000543361 851 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 MIR744-201ENST00000578242 98 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 SMIM12P1-201ENST00000603004 274 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC073389.3-201ENST00000609434 935 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AC073488.6-201ENST00000632293 754 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 AP001153.1-201ENST00000641024 338 ntBASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
TRAF3IP1Q8TDR0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AL359885.1-201ENST00000415786 903 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 DPPA2P2-201ENST00000418220 897 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 VN1R3-201ENST00000418822 919 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 THEM7P-201ENST00000419556 672 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 HMGB1P7-201ENST00000450921 612 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 SDC4P-201ENST00000453285 601 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 PPIAP7-201ENST00000454070 489 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC112484.3-201ENST00000505910 329 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC026782.2-201ENST00000510845 636 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AP000620.1-201ENST00000527147 504 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 OR4A41P-201ENST00000533053 928 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC121758.1-202ENST00000556917 658 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC007346.2-201ENST00000564816 892 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 AL109924.4-201ENST00000623089 670 ntBASIC6.2□□□□□ -1.42
TRAF3IP1Q8TDR0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms