Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 MTCYBP12-201ENST00000440559 1134 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 MTCO2P3-201ENST00000442543 421 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 PFN1P11-201ENST00000445829 389 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 CEACAMP5-201ENST00000448037 961 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AL157884.3-201ENST00000448273 1184 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RAB28P3-201ENST00000448325 597 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC083806.1-201ENST00000468934 316 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RPS3AP22-201ENST00000488297 769 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 SNRPCP11-201ENST00000492453 205 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 OR2A20P-203ENST00000498397 1268 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AL117351.2-201ENST00000513571 157 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC007406.5-201ENST00000570140 3170 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 ARGFXP2-201ENST00000579304 949 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC005726.4-201ENST00000582858 458 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 PRELID3BP3-201ENST00000584963 545 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 RPL7AP69-201ENST00000595306 806 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC012175.1-201ENST00000603755 531 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC020765.1-201ENST00000604296 328 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC013562.2-201ENST00000611632 603 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 MIR6503-201ENST00000622884 86 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC005514.1-201ENST00000623521 208 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC092608.3-201ENST00000625017 386 ntBASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM48Q8IWZ4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC015871.3-201ENST00000618835 2261 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 TMEM75-201ENST00000624314 2165 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 MTND5P11-201ENST00000511037 1812 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SNORD116-12-201ENST00000384468 92 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 UBBP1-201ENST00000392399 473 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SFR1P1-201ENST00000403720 688 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 MIR1204-201ENST00000408388 67 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL663061.1-201ENST00000416625 580 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 HMGB1P49-201ENST00000418882 569 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SPATA20P1-201ENST00000423089 438 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL589823.1-201ENST00000429577 183 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 RPS10P21-201ENST00000430654 475 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC000041.1-201ENST00000439655 175 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL359265.1-201ENST00000440296 795 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC073052.1-201ENST00000440417 714 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 RPL23AP28-201ENST00000448062 470 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL133217.1-201ENST00000450980 425 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms