Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC093166.3-201ENST00000448785 303 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC092967.1-201ENST00000449016 481 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 RANP2-201ENST00000456833 229 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 RN7SL649P-201ENST00000496974 275 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC106822.1-201ENST00000502647 526 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC112484.3-201ENST00000505910 329 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SNX18P25-201ENST00000510539 758 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 ZNF519P4-201ENST00000514008 125 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AP001804.1-201ENST00000526868 919 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 EIF4A2P5-201ENST00000529914 499 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SMIM12P1-201ENST00000603004 274 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL353729.2-201ENST00000605859 1249 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 uc_338.31-201ENST00000615595 186 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 MIR6721-201ENST00000617181 87 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL391597.1-201ENST00000618707 694 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC022726.2-201ENST00000634673 547 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL596275.2-207ENST00000641188 675 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL137141.1-201ENST00000624622 4836 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC068769.1-201ENST00000474767 2426 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC027228.2-201ENST00000567141 2154 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 SHQ1P1-201ENST00000437111 1544 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 RN7SKP171-201ENST00000364417 303 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 SNORA70.9-201ENST00000384370 135 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 MIR433-201ENST00000384837 93 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 RNU11-6P-201ENST00000391127 133 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 RBBP4P5-201ENST00000398583 1266 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC099535.1-201ENST00000408928 371 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 RPS17P17-201ENST00000419392 409 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC113412.1-201ENST00000425840 504 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC079922.1-201ENST00000443291 359 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AL133351.3-201ENST00000454998 193 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 RPL7L1P3-201ENST00000455249 689 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 MARK2P8-201ENST00000476069 952 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC036111.2-201ENST00000533247 901 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 MIR3154-201ENST00000577829 84 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC009303.3-201ENST00000591103 736 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 RPSAP75-201ENST00000605848 301 ntBASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP54Q7Z3B4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms