Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 AC009804.1-201ENST00000400949 179 ntBASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 AP000547.1-201ENST00000454360 617 ntBASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 RN7SL329P-201ENST00000467740 299 ntBASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 HAUS8P1-201ENST00000549005 542 ntBASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 AC024940.4-201ENST00000605507 246 ntBASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 MIR6837-201ENST00000620884 64 ntBASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 AL359195.2-201ENST00000623657 4412 ntBASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC141Q6ZP82 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 OR6D1P-201ENST00000436165 939 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 SUMO2P1-206ENST00000445436 284 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 FAR2P1-206ENST00000449736 709 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 RN7SL172P-201ENST00000460535 303 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 AL355032.1-201ENST00000472981 438 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 OR2AO1P-201ENST00000476497 403 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 RPEP1-201ENST00000504507 658 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 AC253576.1-201ENST00000511645 1156 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 AC092944.2-201ENST00000605443 889 ntBASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC141Q6ZP82 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 AL662795.2-201ENST00000624252 3706 ntBASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 RNA5SP507-201ENST00000363603 121 ntBASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 RN7SKP28-201ENST00000364770 305 ntBASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 AC096775.1-201ENST00000437724 448 ntBASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 AL606490.1-201ENST00000452266 765 ntBASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC141Q6ZP82 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC005034.3-201ENST00000604845 1747 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 RNA5SP339-201ENST00000390987 122 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC245047.2-201ENST00000441060 530 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 EEF1B2P5-201ENST00000444820 548 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 RN7SL610P-201ENST00000463845 291 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC090638.1-201ENST00000498296 909 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC126177.5-201ENST00000549599 178 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AL139407.1-201ENST00000613826 1175 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC037198.3-201ENST00000616754 526 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 AC007938.2-201ENST00000604666 2634 ntBASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC141Q6ZP82 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms