Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC005514.1-201ENST00000623521 208 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AP002505.2-201ENST00000623585 696 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC008033.1-201ENST00000216407 1162 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 SNORD35A-201ENST00000363389 86 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 RN7SKP15-201ENST00000364742 309 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 RN7SKP269-201ENST00000365545 319 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 Y_RNA.578-201ENST00000390903 88 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 USP9YP6-201ENST00000413550 854 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 RPS7P9-201ENST00000414704 586 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 TRIM60P3Y-201ENST00000432201 673 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL354941.1-201ENST00000438600 464 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 Z95152.1-201ENST00000453556 656 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 USP9YP34-201ENST00000453983 808 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AKR1D1P1-201ENST00000457236 936 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC107015.1-201ENST00000466902 747 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 RPS4XP6-201ENST00000477670 797 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AP005202.1-201ENST00000489915 867 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL024509.2-201ENST00000493462 493 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC024589.1-201ENST00000512207 263 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC025881.1-201ENST00000518851 512 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 HMGB1P46-201ENST00000520062 610 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AP001804.1-201ENST00000526868 919 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 NOP56P3-201ENST00000549457 385 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC104229.1-201ENST00000561364 255 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL138976.2-201ENST00000563989 694 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC025162.2-201ENST00000619602 560 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL136221.1-201ENST00000621449 509 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL359757.1-201ENST00000623176 255 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC011008.2-201ENST00000624866 3352 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 AC138627.1-203ENST00000641872 1680 ntBASIC8.94□□□□□ -0.98
RC3H1Q5TC82 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RC3H1Q5TC82 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AL590065.1-201ENST00000603371 4774 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 MIR323B-201ENST00000385269 82 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms