Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SULT1D1P-201ENST00000458020 882 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RPL21P47-201ENST00000483696 477 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RN7SL362P-201ENST00000494228 267 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC021220.1-201ENST00000507445 630 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 HSD3BP3-201ENST00000514706 994 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RN7SKP141-201ENST00000516167 338 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC135983.3-201ENST00000528049 1226 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC139697.1-201ENST00000548429 745 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC087888.1-201ENST00000550884 1254 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 SNX6P1-201ENST00000601728 1224 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC124016.2-201ENST00000610058 665 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AL445647.2-201ENST00000615170 130 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 PARP4P1-201ENST00000435945 2337 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC007342.7-201ENST00000624610 2337 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 IFIT1P1-201ENST00000400497 1449 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AP003486.1-201ENST00000525716 3994 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 RNU4-64P-201ENST00000410795 131 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 UBE2V1P11-201ENST00000411559 285 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC106883.1-201ENST00000418805 562 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 RPA2P2-201ENST00000419698 796 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 VN1R20P-201ENST00000425215 966 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 KCTD9P1-201ENST00000430462 1167 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 PSMD10P2-201ENST00000432890 672 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC069277.2-201ENST00000454211 432 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 RPL5P12-201ENST00000477071 851 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC091874.2-201ENST00000505889 720 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 RNA5SP441-201ENST00000516809 88 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AP003066.2-201ENST00000529375 555 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC006512.2-201ENST00000543250 486 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC018558.5-201ENST00000565840 952 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC008507.2-201ENST00000588402 1176 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC025809.2-201ENST00000625085 1802 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 AC007485.2-201ENST00000623493 1667 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms