Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
GABPAQ06546 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 AC016251.2-201ENST00000623393 3089 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
GABPAQ06546 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 RPS17P17-201ENST00000419392 409 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.89□□□□□ -1.31
GABPAQ06546 AL022331.1-201ENST00000429025 477 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 AL121776.1-201ENST00000429337 372 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 DEFA9P-201ENST00000433042 285 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 LRRC37A14P-201ENST00000452297 462 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 FRG2FP-204ENST00000453982 852 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 PFN1P6-201ENST00000476786 399 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 AC087360.1-201ENST00000518788 616 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 AC022404.1-201ENST00000555320 273 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 AL049779.3-201ENST00000557141 606 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.89□□□□□ -1.31
GABPAQ06546 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 AL049840.6-201ENST00000604583 345 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 AC104695.2-201ENST00000605056 775 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 CU639417.4-201ENST00000623928 207 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 AC087565.3-203ENST00000641018 837 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.89□□□□□ -1.31
GABPAQ06546 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
GABPAQ06546 AC068733.2-201ENST00000605434 1418 ntBASIC6.89□□□□□ -1.31
GABPAQ06546 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
GABPAQ06546 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
GABPAQ06546 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
GABPAQ06546 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
GABPAQ06546 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
GABPAQ06546 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.89□□□□□ -1.31
GABPAQ06546 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
GABPAQ06546 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 AL357752.1-201ENST00000412817 349 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 NME1P1-201ENST00000420914 382 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 HMGB3P24-201ENST00000433260 622 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.88□□□□□ -1.31
GABPAQ06546 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 AC073909.1-201ENST00000447112 999 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.88□□□□□ -1.31
GABPAQ06546 YWHAEP1-201ENST00000453697 763 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 AC022215.1-201ENST00000481770 362 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.88□□□□□ -1.31
GABPAQ06546 MIR2117-201ENST00000516780 80 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 AC139365.2-201ENST00000517972 253 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 MRPS16P1-201ENST00000523462 412 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 AC027667.1-201ENST00000545814 304 ntBASIC6.88□□□□□ -1.31
GABPAQ06546 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.88□□□□□ -1.31
GABPAQ06546 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.88□□□□□ -1.31
GABPAQ06546 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.88□□□□□ -1.31
GABPAQ06546 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.88□□□□□ -1.31
GABPAQ06546 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.88□□□□□ -1.31
GABPAQ06546 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
GABPAQ06546 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
GABPAQ06546 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
GABPAQ06546 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.87□□□□□ -1.31
GABPAQ06546 AC097634.1-201ENST00000604491 2467 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 AC114876.1-201ENST00000490962 1366 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 CIR1P2-201ENST00000514821 1342 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 AL159987.1-201ENST00000347911 293 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 MIR143-201ENST00000385300 106 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.87□□□□□ -1.31
GABPAQ06546 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.87□□□□□ -1.31
GABPAQ06546 RPS26P39-201ENST00000469206 341 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms