Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.93□□□□□ -1.62
LMO4P61968 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 MTCO1P11-201ENST00000429111 1528 ntBASIC4.93□□□□□ -1.62
LMO4P61968 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC4.93□□□□□ -1.62
LMO4P61968 RAD17P2-201ENST00000451754 1977 ntBASIC4.93□□□□□ -1.62
LMO4P61968 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.93□□□□□ -1.62
LMO4P61968 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LMO4P61968 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LMO4P61968 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 FUNDC2P3-201ENST00000334716 533 ntBASIC4.93□□□□□ -1.62
LMO4P61968 RNU6-316P-201ENST00000391027 107 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 RN7SKP229-201ENST00000410465 302 ntBASIC4.93□□□□□ -1.62
LMO4P61968 RN7SKP166-201ENST00000410812 305 ntBASIC4.93□□□□□ -1.62
LMO4P61968 RN7SKP286-201ENST00000410894 299 ntBASIC4.93□□□□□ -1.62
LMO4P61968 NPM1P36-201ENST00000415681 835 ntBASIC4.93□□□□□ -1.62
LMO4P61968 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 AC093155.2-201ENST00000420734 937 ntBASIC4.93□□□□□ -1.62
LMO4P61968 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.93□□□□□ -1.62
LMO4P61968 EIF2S2P3-201ENST00000428356 999 ntBASIC4.93□□□□□ -1.62
LMO4P61968 ELOCP6-201ENST00000429066 328 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AC126120.1-201ENST00000431082 470 ntBASIC4.93□□□□□ -1.62
LMO4P61968 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LMO4P61968 SUMO2P3-201ENST00000438311 288 ntBASIC4.93□□□□□ -1.62
LMO4P61968 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.93□□□□□ -1.62
LMO4P61968 DNAJC19P5-201ENST00000443295 316 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AP000281.1-201ENST00000444036 316 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.93□□□□□ -1.62
LMO4P61968 SDC4P-201ENST00000453285 601 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 ELOCP12-201ENST00000458706 328 ntBASIC4.93□□□□□ -1.62
LMO4P61968 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 AC135999.1-201ENST00000478962 479 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 CCDC11P1-201ENST00000503137 1162 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.93□□□□□ -1.62
LMO4P61968 GAPDHP71-201ENST00000511530 1003 ntBASIC4.93□□□□□ -1.62
LMO4P61968 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 SNORA70.20-201ENST00000516848 126 ntBASIC4.93□□□□□ -1.62
LMO4P61968 SNORA81.2-201ENST00000516868 170 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AP002981.1-201ENST00000517692 975 ntBASIC4.93□□□□□ -1.62
LMO4P61968 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LMO4P61968 OR4A40P-201ENST00000533878 948 ntBASIC4.93□□□□□ -1.62
LMO4P61968 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.93□□□□□ -1.62
LMO4P61968 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.93□□□□□ -1.62
LMO4P61968 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 AC011497.2-201ENST00000600255 639 ntBASIC4.93□□□□□ -1.62
LMO4P61968 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC4.93□□□□□ -1.62
LMO4P61968 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.93□□□□□ -1.62
LMO4P61968 AL355816.2-201ENST00000610049 647 ntBASIC4.93□□□□□ -1.62
LMO4P61968 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 AC239803.2-201ENST00000610161 430 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AL352984.2-201ENST00000611153 546 ntBASIC4.93□□□□□ -1.62
LMO4P61968 AC109309.2-201ENST00000612597 332 ntBASIC4.93□□□□□ -1.62
LMO4P61968 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.93□□□□□ -1.62
LMO4P61968 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.93□□□□□ -1.62
LMO4P61968 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.93□□□□□ -1.62
LMO4P61968 AP003400.2-201ENST00000624036 666 ntBASIC4.93□□□□□ -1.62
LMO4P61968 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.93□□□□□ -1.62
LMO4P61968 MIR193BHG-214ENST00000641765 509 ntBASIC4.93□□□□□ -1.62
LMO4P61968 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC4.93□□□□□ -1.62
LMO4P61968 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
LMO4P61968 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.93□□□□□ -1.62
LMO4P61968 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LMO4P61968 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 AC233968.1-201ENST00000611212 1300 ntBASIC4.93□□□□□ -1.62
LMO4P61968 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMO4P61968 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LMO4P61968 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LMO4P61968 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.92□□□□□ -1.62
LMO4P61968 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms