Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS1BP61024 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 AC079776.5-201ENST00000641920 211 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CKS1BP61024 NR1H5P-201ENST00000452683 1377 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CKS1BP61024 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS1BP61024 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS1BP61024 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
CKS1BP61024 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 CASC19-204ENST00000641001 2055 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 U3.7-201ENST00000363668 216 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AC074375.1-201ENST00000372993 192 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AL096800.1-201ENST00000405326 893 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 MEG8-201ENST00000414488 800 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 NMD3P2-201ENST00000421815 761 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 OR52S1P-201ENST00000427016 937 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 RPL34P6-201ENST00000432390 345 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 CHCHD4P5-201ENST00000436684 427 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 MTND6P18-201ENST00000439477 513 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 HMGB3P9-201ENST00000441799 583 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 RPL6P24-201ENST00000445338 864 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 NPM1P39-201ENST00000449818 867 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 AL645937.3-201ENST00000453647 936 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 RAB28P2-201ENST00000454299 641 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 OR9A1P-202ENST00000484361 945 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 RPSAP51-201ENST00000497462 645 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 RNA5SP360-201ENST00000516555 118 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AC021733.2-201ENST00000518830 497 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC107918.3-201ENST00000533272 382 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 VDAC2P2-201ENST00000544463 901 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC091932.1-201ENST00000569381 427 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 MIR4312-201ENST00000579909 76 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.22□□□□□ -1.73
CKS1BP61024 AL008723.3-201ENST00000608926 449 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AP001962.1-201ENST00000624114 559 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC073488.9-201ENST00000631601 754 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS1BP61024 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC092692.1-201ENST00000623625 2595 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 AC126474.2-201ENST00000623268 1750 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 AC008079.2-201ENST00000623543 20396 ntBASIC4.22□□□□□ -1.73
CKS1BP61024 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS1BP61024 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CKS1BP61024 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.21□□□□□ -1.73
CKS1BP61024 QRSL1P3-201ENST00000552666 1316 ntBASIC4.21□□□□□ -1.73
CKS1BP61024 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CKS1BP61024 AL049869.1-201ENST00000556933 1402 ntBASIC4.21□□□□□ -1.73
CKS1BP61024 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CKS1BP61024 AL513548.1-201ENST00000562904 1724 ntBASIC4.21□□□□□ -1.73
CKS1BP61024 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms