Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SNORA77.2-201ENST00000408571 112 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 RN7SKP121-201ENST00000410842 305 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 RN7SKP205-201ENST00000410999 307 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 AC079809.1-201ENST00000415468 276 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 PTCD2P2-201ENST00000415579 1095 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.92□□□□□ -1.62
SPCS3P61009 SOCS5P1-201ENST00000440415 949 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.92□□□□□ -1.62
SPCS3P61009 RPS10P14-201ENST00000440748 502 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 BMS1P11-201ENST00000442351 885 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 CUBNP2-201ENST00000443534 1139 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.92□□□□□ -1.62
SPCS3P61009 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 AL133480.2-201ENST00000456723 487 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 BMS1P9-201ENST00000457640 885 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 MTCO1P55-201ENST00000489829 745 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 SNX18P24-201ENST00000505249 671 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.92□□□□□ -1.62
SPCS3P61009 AC008868.1-201ENST00000509786 737 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 snoU109.5-201ENST00000516231 132 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 AP002004.1-206ENST00000532441 876 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.92□□□□□ -1.62
SPCS3P61009 AP001858.2-201ENST00000536213 601 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.92□□□□□ -1.62
SPCS3P61009 AC008055.1-201ENST00000547032 609 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.92□□□□□ -1.62
SPCS3P61009 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.92□□□□□ -1.62
SPCS3P61009 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.92□□□□□ -1.62
SPCS3P61009 AC100832.2-201ENST00000582080 776 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.92□□□□□ -1.62
SPCS3P61009 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.92□□□□□ -1.62
SPCS3P61009 AP001005.3-201ENST00000622049 129 ntBASIC4.92□□□□□ -1.62
SPCS3P61009 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.92□□□□□ -1.62
SPCS3P61009 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.92□□□□□ -1.62
SPCS3P61009 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.92□□□□□ -1.62
SPCS3P61009 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SPCS3P61009 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
SPCS3P61009 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPCS3P61009 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.91□□□□□ -1.62
SPCS3P61009 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC083843.3-201ENST00000623679 2186 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 AC093225.1-201ENST00000506867 1408 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 RN7SKP128-201ENST00000364270 303 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 AL117344.1-201ENST00000407196 616 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 RN7SKP166-201ENST00000410812 305 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 RN7SKP286-201ENST00000410894 299 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 RNA5SP155-201ENST00000411154 129 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 RPL21P50-201ENST00000417698 477 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.91□□□□□ -1.62
SPCS3P61009 USP24P1-201ENST00000433802 779 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 AC092447.2-201ENST00000435487 669 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 AL450263.2-201ENST00000439400 589 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 GTF2IP14-201ENST00000441415 586 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.91□□□□□ -1.62
SPCS3P61009 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 AL591363.1-201ENST00000450091 483 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 AC009244.1-201ENST00000450566 258 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 RPL12P31-201ENST00000478433 450 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 RPL7AP10-201ENST00000481016 791 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.91□□□□□ -1.62
SPCS3P61009 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.91□□□□□ -1.62
SPCS3P61009 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.91□□□□□ -1.62
SPCS3P61009 RN7SKP64-201ENST00000517206 328 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC244502.2-201ENST00000543361 851 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SPCS3P61009 CHEK2P2-201ENST00000554701 672 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.91□□□□□ -1.62
SPCS3P61009 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.91□□□□□ -1.62
SPCS3P61009 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.91□□□□□ -1.62
SPCS3P61009 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.91□□□□□ -1.62
SPCS3P61009 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPCS3P61009 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
SPCS3P61009 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.91□□□□□ -1.62
SPCS3P61009 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SPCS3P61009 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SPCS3P61009 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms