Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC023632.6-201ENST00000624338 2177 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.72□□□□□ -1.49
VSX2P58304 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VSX2P58304 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.72□□□□□ -1.49
VSX2P58304 AL360271.1-201ENST00000395679 510 ntBASIC5.72□□□□□ -1.49
VSX2P58304 RPL35AP3-201ENST00000414680 288 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.72□□□□□ -1.49
VSX2P58304 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.72□□□□□ -1.49
VSX2P58304 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 AC016027.5-201ENST00000427227 210 ntBASIC5.72□□□□□ -1.49
VSX2P58304 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.72□□□□□ -1.49
VSX2P58304 GAPDHP75-201ENST00000433910 943 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.72□□□□□ -1.49
VSX2P58304 AL359839.1-201ENST00000451975 1160 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC016724.1-201ENST00000453215 421 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.72□□□□□ -1.49
VSX2P58304 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.72□□□□□ -1.49
VSX2P58304 AC008629.2-201ENST00000503783 483 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC114781.3-201ENST00000512083 142 ntBASIC5.72□□□□□ -1.49
VSX2P58304 SETP21-201ENST00000514799 892 ntBASIC5.72□□□□□ -1.49
VSX2P58304 SCARNA18.1-201ENST00000516330 83 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC060775.1-201ENST00000518241 520 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.72□□□□□ -1.49
VSX2P58304 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.72□□□□□ -1.49
VSX2P58304 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.72□□□□□ -1.49
VSX2P58304 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.72□□□□□ -1.49
VSX2P58304 AC068305.2-201ENST00000550567 1205 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.72□□□□□ -1.49
VSX2P58304 AC108865.2-201ENST00000606881 432 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AC015982.1-201ENST00000608113 465 ntBASIC5.72□□□□□ -1.49
VSX2P58304 MIR6793-201ENST00000612376 63 ntBASIC5.72□□□□□ -1.49
VSX2P58304 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.72□□□□□ -1.49
VSX2P58304 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.72□□□□□ -1.49
VSX2P58304 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VSX2P58304 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VSX2P58304 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VSX2P58304 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VSX2P58304 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VSX2P58304 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.71□□□□□ -1.49
VSX2P58304 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
VSX2P58304 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VSX2P58304 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.71□□□□□ -1.5
VSX2P58304 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.71□□□□□ -1.5
VSX2P58304 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.71□□□□□ -1.5
VSX2P58304 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.71□□□□□ -1.5
VSX2P58304 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VSX2P58304 HMGN1P20-201ENST00000411849 300 ntBASIC5.71□□□□□ -1.5
VSX2P58304 AL354890.1-201ENST00000413730 346 ntBASIC5.71□□□□□ -1.5
VSX2P58304 TUBB4BP6-201ENST00000437576 479 ntBASIC5.71□□□□□ -1.5
VSX2P58304 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VSX2P58304 ACA64.4-201ENST00000459070 127 ntBASIC5.71□□□□□ -1.5
VSX2P58304 AC104164.1-201ENST00000460282 590 ntBASIC5.71□□□□□ -1.5
VSX2P58304 AC023245.1-201ENST00000468501 517 ntBASIC5.71□□□□□ -1.5
VSX2P58304 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.71□□□□□ -1.5
VSX2P58304 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.71□□□□□ -1.5
VSX2P58304 OR5D2P-201ENST00000524390 911 ntBASIC5.71□□□□□ -1.5
VSX2P58304 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.71□□□□□ -1.5
VSX2P58304 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.71□□□□□ -1.5
VSX2P58304 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.71□□□□□ -1.5
VSX2P58304 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.71□□□□□ -1.5
VSX2P58304 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.71□□□□□ -1.5
VSX2P58304 MIR4776-2-201ENST00000580204 80 ntBASIC5.71□□□□□ -1.5
VSX2P58304 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.71□□□□□ -1.5
VSX2P58304 AC004890.3-201ENST00000605566 1095 ntBASIC5.71□□□□□ -1.5
VSX2P58304 AC018690.1-201ENST00000608144 626 ntBASIC5.71□□□□□ -1.5
VSX2P58304 AC016542.2-201ENST00000624201 619 ntBASIC5.71□□□□□ -1.5
VSX2P58304 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.71□□□□□ -1.5
VSX2P58304 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.71□□□□□ -1.5
VSX2P58304 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.71□□□□□ -1.5
VSX2P58304 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VSX2P58304 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.71□□□□□ -1.5
VSX2P58304 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VSX2P58304 AC087516.1-201ENST00000561236 2428 ntBASIC5.7□□□□□ -1.5
VSX2P58304 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VSX2P58304 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VSX2P58304 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VSX2P58304 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VSX2P58304 OR7E25P-201ENST00000344844 931 ntBASIC5.7□□□□□ -1.5
VSX2P58304 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VSX2P58304 LYPLA1P3-201ENST00000402650 695 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms