Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CMC4P56277 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CMC4P56277 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CMC4P56277 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.44□□□□□ -1.7
CMC4P56277 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CMC4P56277 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.44□□□□□ -1.7
CMC4P56277 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CMC4P56277 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CMC4P56277 AL132656.3-201ENST00000606384 1595 ntBASIC4.44□□□□□ -1.7
CMC4P56277 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CMC4P56277 AL117378.2-201ENST00000622916 1337 ntBASIC4.44□□□□□ -1.7
CMC4P56277 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CMC4P56277 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CMC4P56277 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CMC4P56277 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 PDZK1P1-202ENST00000425209 1350 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC018717.1-201ENST00000457712 1505 ntBASIC4.43□□□□□ -1.7
CMC4P56277 TET1P1-201ENST00000426627 2301 ntBASIC4.43□□□□□ -1.7
CMC4P56277 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CMC4P56277 SELENOWP1-201ENST00000322792 252 ntBASIC4.43□□□□□ -1.7
CMC4P56277 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 MTND4LP17-201ENST00000414607 293 ntBASIC4.43□□□□□ -1.7
CMC4P56277 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 AC015977.1-201ENST00000418887 292 ntBASIC4.43□□□□□ -1.7
CMC4P56277 RPS4XP5-201ENST00000419038 768 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AK4P4-201ENST00000419465 646 ntBASIC4.43□□□□□ -1.7
CMC4P56277 KIF4CP-201ENST00000422742 1279 ntBASIC4.43□□□□□ -1.7
CMC4P56277 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC110602.1-201ENST00000437414 318 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.43□□□□□ -1.7
CMC4P56277 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 RPS7P3-201ENST00000443360 580 ntBASIC4.43□□□□□ -1.7
CMC4P56277 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 MEMO1P4-201ENST00000453590 386 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 AL603882.1-201ENST00000463059 681 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AP002884.1-201ENST00000479691 655 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 RN7SL57P-201ENST00000493687 290 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC025458.1-201ENST00000506046 166 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AL158068.1-201ENST00000506116 616 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC074255.1-201ENST00000511259 501 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.43□□□□□ -1.7
CMC4P56277 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 RN7SKP288-201ENST00000516227 268 ntBASIC4.43□□□□□ -1.7
CMC4P56277 snoU109.5-201ENST00000516231 132 ntBASIC4.43□□□□□ -1.7
CMC4P56277 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CMC4P56277 IGKV3D-25-201ENST00000519599 235 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.43□□□□□ -1.7
CMC4P56277 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.43□□□□□ -1.7
CMC4P56277 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 PCNAP4-201ENST00000532690 730 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC079905.1-201ENST00000549280 475 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 AC079600.1-201ENST00000550326 297 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.43□□□□□ -1.7
CMC4P56277 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.43□□□□□ -1.7
CMC4P56277 AC067773.1-201ENST00000603284 1094 ntBASIC4.43□□□□□ -1.7
CMC4P56277 FAM27E4-201ENST00000605259 342 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AC016252.1-201ENST00000609721 474 ntBASIC4.43□□□□□ -1.7
CMC4P56277 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CMC4P56277 AC117409.1-201ENST00000470499 1310 ntBASIC4.43□□□□□ -1.7
CMC4P56277 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.43□□□□□ -1.7
CMC4P56277 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CMC4P56277 AC009135.2-201ENST00000624136 1768 ntBASIC4.42□□□□□ -1.7
CMC4P56277 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.42□□□□□ -1.7
CMC4P56277 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CMC4P56277 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.42□□□□□ -1.7
CMC4P56277 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CMC4P56277 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CMC4P56277 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CMC4P56277 AL354854.1-201ENST00000455940 1363 ntBASIC4.42□□□□□ -1.7
CMC4P56277 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CMC4P56277 AC090220.1-201ENST00000593078 1699 ntBASIC4.42□□□□□ -1.7
CMC4P56277 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CMC4P56277 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CMC4P56277 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CMC4P56277 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms