Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH6P55285 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CDH6P55285 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH6P55285 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH6P55285 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CDH6P55285 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH6P55285 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH6P55285 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDH6P55285 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH6P55285 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CDH6P55285 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH6P55285 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDH6P55285 QRSL1P1-201ENST00000400977 1540 ntBASIC6.12□□□□□ -1.43
CDH6P55285 AL096711.1-201ENST00000404780 554 ntBASIC6.12□□□□□ -1.43
CDH6P55285 KIF4CP-201ENST00000422742 1279 ntBASIC6.12□□□□□ -1.43
CDH6P55285 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH6P55285 AL590399.2-201ENST00000427536 309 ntBASIC6.12□□□□□ -1.43
CDH6P55285 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH6P55285 AC007679.3-201ENST00000434035 414 ntBASIC6.12□□□□□ -1.43
CDH6P55285 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDH6P55285 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH6P55285 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH6P55285 AC005077.1-201ENST00000449226 375 ntBASIC6.12□□□□□ -1.43
CDH6P55285 CFL1P4-201ENST00000451536 498 ntBASIC6.12□□□□□ -1.43
CDH6P55285 PPIAP27-201ENST00000453800 265 ntBASIC6.12□□□□□ -1.43
CDH6P55285 snoU13.29-201ENST00000459370 104 ntBASIC6.12□□□□□ -1.43
CDH6P55285 AC068228.1-201ENST00000461723 211 ntBASIC6.12□□□□□ -1.43
CDH6P55285 RN7SL168P-201ENST00000463821 279 ntBASIC6.12□□□□□ -1.43
CDH6P55285 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH6P55285 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH6P55285 AP003396.4-201ENST00000527574 265 ntBASIC6.12□□□□□ -1.43
CDH6P55285 RPA2P1-201ENST00000556557 721 ntBASIC6.12□□□□□ -1.43
CDH6P55285 KYNUP3-201ENST00000574386 1341 ntBASIC6.12□□□□□ -1.43
CDH6P55285 AC008507.3-201ENST00000585753 472 ntBASIC6.12□□□□□ -1.43
CDH6P55285 AC006115.2-201ENST00000596823 202 ntBASIC6.12□□□□□ -1.43
CDH6P55285 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH6P55285 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH6P55285 AC245014.3-201ENST00000618589 347 ntBASIC6.12□□□□□ -1.43
CDH6P55285 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH6P55285 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH6P55285 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH6P55285 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH6P55285 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDH6P55285 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH6P55285 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
CDH6P55285 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CDH6P55285 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH6P55285 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH6P55285 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH6P55285 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDH6P55285 COX6B1P3-201ENST00000312310 260 ntBASIC6.11□□□□□ -1.43
CDH6P55285 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDH6P55285 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.11□□□□□ -1.43
CDH6P55285 GAPDHP75-201ENST00000433910 943 ntBASIC6.11□□□□□ -1.43
CDH6P55285 KRT8P51-201ENST00000438938 274 ntBASIC6.11□□□□□ -1.43
CDH6P55285 ATP5LP2-201ENST00000440646 311 ntBASIC6.11□□□□□ -1.43
CDH6P55285 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 RSU1P1-201ENST00000453416 441 ntBASIC6.11□□□□□ -1.43
CDH6P55285 AC023194.2-201ENST00000465398 406 ntBASIC6.11□□□□□ -1.43
CDH6P55285 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 RBBP4P1-201ENST00000502424 1276 ntBASIC6.11□□□□□ -1.43
CDH6P55285 LSM3P4-201ENST00000502948 309 ntBASIC6.11□□□□□ -1.43
CDH6P55285 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH6P55285 RNA5SP473-201ENST00000516402 125 ntBASIC6.11□□□□□ -1.43
CDH6P55285 Vault.2-201ENST00000516519 98 ntBASIC6.11□□□□□ -1.43
CDH6P55285 AC011853.1-201ENST00000518911 454 ntBASIC6.11□□□□□ -1.43
CDH6P55285 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH6P55285 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH6P55285 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH6P55285 AC107958.1-201ENST00000556576 290 ntBASIC6.11□□□□□ -1.43
CDH6P55285 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH6P55285 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH6P55285 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH6P55285 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.11□□□□□ -1.43
CDH6P55285 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.11□□□□□ -1.43
CDH6P55285 OOSP1P2-201ENST00000579644 351 ntBASIC6.11□□□□□ -1.43
CDH6P55285 AC090236.2-201ENST00000587933 1101 ntBASIC6.11□□□□□ -1.43
CDH6P55285 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.11□□□□□ -1.43
CDH6P55285 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH6P55285 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH6P55285 AC073593.1-201ENST00000624500 411 ntBASIC6.11□□□□□ -1.43
CDH6P55285 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH6P55285 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 PARP4P2-201ENST00000446672 3326 ntBASIC6.11□□□□□ -1.43
CDH6P55285 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms