Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 AC006511.3-201ENST00000624929 1783 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.54□□□□□ -1.36
CLCN3P51790 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 AL161901.1-201ENST00000624954 3425 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.54□□□□□ -1.36
CLCN3P51790 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 MIR375-201ENST00000362103 64 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 RNA5SP242-201ENST00000364171 118 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 RNA5SP211-201ENST00000365516 117 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 OR7E101P-201ENST00000400428 513 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 RPS3AP2-201ENST00000407190 754 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 RN7SKP166-201ENST00000410812 305 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AC116036.1-201ENST00000412199 367 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.54□□□□□ -1.36
CLCN3P51790 MRPL53P1-201ENST00000414323 319 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.54□□□□□ -1.36
CLCN3P51790 AC099677.3-201ENST00000427081 395 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.54□□□□□ -1.36
CLCN3P51790 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 AC064862.4-201ENST00000442180 334 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CLCN3P51790 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.54□□□□□ -1.36
CLCN3P51790 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.54□□□□□ -1.36
CLCN3P51790 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
CLCN3P51790 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.54□□□□□ -1.36
CLCN3P51790 GARSP1-201ENST00000570895 719 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.54□□□□□ -1.36
CLCN3P51790 MIR132-201ENST00000591554 101 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AC090953.1-201ENST00000604305 1092 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AP001885.1-201ENST00000621658 558 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.54□□□□□ -1.36
CLCN3P51790 AC087269.2-201ENST00000641764 975 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 MTCO1P8-201ENST00000416914 1523 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CLCN3P51790 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLCN3P51790 AC022034.1-201ENST00000512867 2156 ntBASIC6.54□□□□□ -1.36
CLCN3P51790 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.54□□□□□ -1.36
CLCN3P51790 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CLCN3P51790 CR383656.5-201ENST00000547616 1340 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.53□□□□□ -1.36
CLCN3P51790 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.53□□□□□ -1.36
CLCN3P51790 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLCN3P51790 RN7SKP29-201ENST00000410957 272 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CLCN3P51790 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.53□□□□□ -1.36
CLCN3P51790 AC127526.2-201ENST00000426436 775 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CLCN3P51790 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 RPS12P17-201ENST00000438591 377 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 AP000281.1-201ENST00000444036 316 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLCN3P51790 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.53□□□□□ -1.36
CLCN3P51790 AC011411.1-201ENST00000509592 876 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.53□□□□□ -1.36
CLCN3P51790 HMGN2P36-201ENST00000529541 409 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.53□□□□□ -1.36
CLCN3P51790 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.53□□□□□ -1.36
CLCN3P51790 AL683813.2-201ENST00000605245 502 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 AC107308.1-201ENST00000615897 301 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.53□□□□□ -1.36
CLCN3P51790 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.53□□□□□ -1.36
CLCN3P51790 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.53□□□□□ -1.36
CLCN3P51790 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 OR52B5P-204ENST00000641744 3467 ntBASIC6.53□□□□□ -1.36
CLCN3P51790 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLCN3P51790 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.53□□□□□ -1.36
CLCN3P51790 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CLCN3P51790 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.52□□□□□ -1.36
CLCN3P51790 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.52□□□□□ -1.37
CLCN3P51790 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
CLCN3P51790 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CLCN3P51790 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLCN3P51790 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.52□□□□□ -1.37
CLCN3P51790 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLCN3P51790 SNORA51.1-201ENST00000363243 140 ntBASIC6.52□□□□□ -1.37
CLCN3P51790 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms