Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MIR4691-201ENST00000583764 85 ntBASIC6.12□□□□□ -1.43
BRCA2P51587 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.12□□□□□ -1.43
BRCA2P51587 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRCA2P51587 CASC19-205ENST00000641013 1411 ntBASIC6.12□□□□□ -1.43
BRCA2P51587 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 AC144833.1-201ENST00000567953 4089 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 AC011379.1-201ENST00000508713 3025 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.11□□□□□ -1.43
BRCA2P51587 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.11□□□□□ -1.43
BRCA2P51587 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 LRRC37A17P-201ENST00000570311 4693 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 AC013268.3-201ENST00000262716 2324 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.11□□□□□ -1.43
BRCA2P51587 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
BRCA2P51587 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BRCA2P51587 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BRCA2P51587 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BRCA2P51587 RNU1-146P-201ENST00000364015 165 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.11□□□□□ -1.43
BRCA2P51587 DUTP1-201ENST00000493631 470 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.11□□□□□ -1.43
BRCA2P51587 RN7SKP288-201ENST00000516227 268 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 BNIP3P33-201ENST00000598912 569 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 AC073575.2-201ENST00000614212 627 ntBASIC6.11□□□□□ -1.43
BRCA2P51587 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
BRCA2P51587 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 AL078599.1-201ENST00000402075 293 ntBASIC6.1□□□□□ -1.43
BRCA2P51587 AC007064.3-201ENST00000422608 359 ntBASIC6.1□□□□□ -1.43
BRCA2P51587 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.1□□□□□ -1.43
BRCA2P51587 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.1□□□□□ -1.43
BRCA2P51587 AC095055.1-201ENST00000603472 1113 ntBASIC6.1□□□□□ -1.43
BRCA2P51587 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC6.1□□□□□ -1.43
BRCA2P51587 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
BRCA2P51587 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC6.1□□□□□ -1.43
BRCA2P51587 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.1□□□□□ -1.43
BRCA2P51587 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.1□□□□□ -1.43
BRCA2P51587 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
BRCA2P51587 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
BRCA2P51587 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.1□□□□□ -1.43
BRCA2P51587 AC007494.1-201ENST00000562293 760 ntBASIC6.1□□□□□ -1.43
BRCA2P51587 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.1□□□□□ -1.43
BRCA2P51587 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.1□□□□□ -1.43
BRCA2P51587 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCA2P51587 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.1□□□□□ -1.43
BRCA2P51587 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
BRCA2P51587 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
BRCA2P51587 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
BRCA2P51587 RPL36AP15-201ENST00000444514 266 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.09□□□□□ -1.43
BRCA2P51587 RN7SKP122-201ENST00000515923 296 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 AC026688.1-201ENST00000520639 1168 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.09□□□□□ -1.43
BRCA2P51587 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
BRCA2P51587 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 AL512782.1-201ENST00000603093 364 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 AC137695.1-201ENST00000604126 489 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 RNA5SP373-201ENST00000517271 95 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 IGHV1-14-201ENST00000523391 241 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 DPPA3P2-202ENST00000557188 1219 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 AC104162.1-201ENST00000430831 2382 ntBASIC6.09□□□□□ -1.43
BRCA2P51587 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms