Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 LDHAP2-201ENST00000437325 985 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 AL022319.1-201ENST00000458183 1167 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 AC006463.2-201ENST00000473326 348 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 AC068522.1-201ENST00000482895 345 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 AC083982.1-201ENST00000485679 344 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 RN7SL346P-201ENST00000491561 294 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 AC137768.1-201ENST00000549998 553 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 NMNAT1P5-201ENST00000559657 841 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SMARCA2P51531 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SMARCA2P51531 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SMARCA2P51531 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA2P51531 AC131649.2-201ENST00000624925 4439 ntBASIC10.2□□□□□ -0.78
SMARCA2P51531 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SMARCA2P51531 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA2P51531 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA2P51531 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA2P51531 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SMARCA2P51531 RNA5SP87-201ENST00000384155 118 ntBASIC10.19□□□□□ -0.78
SMARCA2P51531 AL133325.1-201ENST00000421090 382 ntBASIC10.19□□□□□ -0.78
SMARCA2P51531 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC10.19□□□□□ -0.78
SMARCA2P51531 RN7SL591P-201ENST00000496150 292 ntBASIC10.19□□□□□ -0.78
SMARCA2P51531 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC10.19□□□□□ -0.78
SMARCA2P51531 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC10.19□□□□□ -0.78
SMARCA2P51531 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC10.19□□□□□ -0.78
SMARCA2P51531 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA2P51531 AC009163.6-201ENST00000612367 342 ntBASIC10.19□□□□□ -0.78
SMARCA2P51531 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA2P51531 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA2P51531 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA2P51531 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA2P51531 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA2P51531 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA2P51531 IMMTP1-201ENST00000435590 2219 ntBASIC10.19□□□□□ -0.78
SMARCA2P51531 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA2P51531 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
SMARCA2P51531 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC10.18□□□□□ -0.78
SMARCA2P51531 RNVU1-6-201ENST00000364688 164 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 CYB5AP4-201ENST00000396692 399 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 U3.36-201ENST00000408418 213 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC10.18□□□□□ -0.78
SMARCA2P51531 NDUFAF4P3-201ENST00000456468 525 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC10.18□□□□□ -0.78
SMARCA2P51531 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC10.18□□□□□ -0.78
SMARCA2P51531 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC10.18□□□□□ -0.78
SMARCA2P51531 IGLV2-34-201ENST00000490007 283 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
SMARCA2P51531 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC10.18□□□□□ -0.78
SMARCA2P51531 AC025574.2-201ENST00000615621 514 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SMARCA2P51531 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC10.18□□□□□ -0.78
SMARCA2P51531 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SMARCA2P51531 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC10.18□□□□□ -0.78
SMARCA2P51531 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
SMARCA2P51531 MAPK10-365ENST00000641902 3825 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA2P51531 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC10.18□□□□□ -0.78
SMARCA2P51531 AC109462.1-201ENST00000491087 368 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 TPM3P3-201ENST00000521343 354 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 BLZF2P-201ENST00000553776 1130 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 AC020765.1-201ENST00000604296 328 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 WBP1LP8-201ENST00000617401 327 ntBASIC10.18□□□□□ -0.78
SMARCA2P51531 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SMARCA2P51531 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC10.17□□□□□ -0.78
SMARCA2P51531 OR9K1P-202ENST00000641111 3217 ntBASIC10.17□□□□□ -0.78
SMARCA2P51531 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 ZNF733P-202ENST00000444809 1573 ntBASIC10.17□□□□□ -0.78
SMARCA2P51531 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SMARCA2P51531 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SMARCA2P51531 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms