Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.29□□□□□ -1.56
SRP9P49458 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SRP9P49458 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SRP9P49458 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.28□□□□□ -1.56
SRP9P49458 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 AC239868.2-201ENST00000564237 4527 ntBASIC5.28□□□□□ -1.56
SRP9P49458 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SRP9P49458 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 RNA5SP232-201ENST00000364144 119 ntBASIC5.28□□□□□ -1.56
SRP9P49458 YWHAZP6-201ENST00000399764 738 ntBASIC5.28□□□□□ -1.56
SRP9P49458 RNA5SP156-201ENST00000410250 110 ntBASIC5.28□□□□□ -1.56
SRP9P49458 BX119904.3-201ENST00000428194 957 ntBASIC5.28□□□□□ -1.56
SRP9P49458 BX276092.6-201ENST00000430476 250 ntBASIC5.28□□□□□ -1.56
SRP9P49458 AC108479.1-201ENST00000431142 427 ntBASIC5.28□□□□□ -1.56
SRP9P49458 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.28□□□□□ -1.56
SRP9P49458 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 HMGB1P7-201ENST00000450921 612 ntBASIC5.28□□□□□ -1.56
SRP9P49458 AC118758.1-202ENST00000454719 225 ntBASIC5.28□□□□□ -1.56
SRP9P49458 BX276092.8-201ENST00000455722 250 ntBASIC5.28□□□□□ -1.56
SRP9P49458 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.28□□□□□ -1.56
SRP9P49458 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 snoU109.5-201ENST00000516231 132 ntBASIC5.28□□□□□ -1.56
SRP9P49458 Y_RNA.710-201ENST00000516975 110 ntBASIC5.28□□□□□ -1.56
SRP9P49458 RN7SKP183-201ENST00000517169 324 ntBASIC5.28□□□□□ -1.56
SRP9P49458 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.28□□□□□ -1.56
SRP9P49458 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 AP001858.2-201ENST00000536213 601 ntBASIC5.28□□□□□ -1.56
SRP9P49458 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.28□□□□□ -1.56
SRP9P49458 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.28□□□□□ -1.56
SRP9P49458 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 AC002519.2-203ENST00000567043 837 ntBASIC5.28□□□□□ -1.56
SRP9P49458 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.28□□□□□ -1.56
SRP9P49458 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.28□□□□□ -1.56
SRP9P49458 AL359091.2-201ENST00000609303 556 ntBASIC5.28□□□□□ -1.56
SRP9P49458 AC092681.3-201ENST00000609463 678 ntBASIC5.28□□□□□ -1.56
SRP9P49458 uc_338.31-201ENST00000615595 186 ntBASIC5.28□□□□□ -1.56
SRP9P49458 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.28□□□□□ -1.56
SRP9P49458 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 AC073869.7-201ENST00000640874 297 ntBASIC5.28□□□□□ -1.56
SRP9P49458 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 AL359091.1-201ENST00000449048 1734 ntBASIC5.28□□□□□ -1.56
SRP9P49458 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.28□□□□□ -1.56
SRP9P49458 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.28□□□□□ -1.56
SRP9P49458 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SRP9P49458 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.27□□□□□ -1.57
SRP9P49458 BCORP1-203ENST00000513194 5093 ntBASIC5.27□□□□□ -1.57
SRP9P49458 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SRP9P49458 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.27□□□□□ -1.57
SRP9P49458 PARP4P2-201ENST00000446672 3326 ntBASIC5.27□□□□□ -1.57
SRP9P49458 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SRP9P49458 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SRP9P49458 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SRP9P49458 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.27□□□□□ -1.57
SRP9P49458 SNORA77.2-201ENST00000408571 112 ntBASIC5.27□□□□□ -1.57
SRP9P49458 RPS7P14-201ENST00000426405 583 ntBASIC5.27□□□□□ -1.57
SRP9P49458 VTI1BP4-201ENST00000427516 527 ntBASIC5.27□□□□□ -1.57
SRP9P49458 PSMD10P2-201ENST00000432890 672 ntBASIC5.27□□□□□ -1.57
SRP9P49458 RPL12P18-201ENST00000437175 325 ntBASIC5.27□□□□□ -1.57
SRP9P49458 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
SRP9P49458 AC010240.2-201ENST00000445363 1205 ntBASIC5.27□□□□□ -1.57
SRP9P49458 AL162739.1-201ENST00000450606 307 ntBASIC5.27□□□□□ -1.57
SRP9P49458 AL117692.1-201ENST00000494283 713 ntBASIC5.27□□□□□ -1.57
SRP9P49458 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.27□□□□□ -1.57
SRP9P49458 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
SRP9P49458 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.27□□□□□ -1.57
SRP9P49458 AC092865.1-201ENST00000544395 1023 ntBASIC5.27□□□□□ -1.57
SRP9P49458 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.27□□□□□ -1.57
SRP9P49458 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.27□□□□□ -1.57
SRP9P49458 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.27□□□□□ -1.57
SRP9P49458 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.27□□□□□ -1.57
SRP9P49458 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.27□□□□□ -1.57
SRP9P49458 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms