Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CR1P49238 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.23□□□□□ -1.57
CX3CR1P49238 MRPS21P8-201ENST00000569196 235 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 AL078601.3-201ENST00000573303 535 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CR1P49238 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CR1P49238 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 AC092681.3-201ENST00000609463 678 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 AC015819.1-201ENST00000613588 663 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 AL512652.1-201ENST00000619006 500 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 AL512356.3-201ENST00000623005 461 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 SNX18P12-201ENST00000624821 759 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CR1P49238 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CX3CR1P49238 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
CX3CR1P49238 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CR1P49238 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CX3CR1P49238 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CR1P49238 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CX3CR1P49238 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 AL022311.1-201ENST00000623726 19416 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AL034417.1-201ENST00000399343 800 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 RNA5SP198-201ENST00000410376 127 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC245096.1-201ENST00000413104 546 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AL354766.1-201ENST00000423396 542 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC099782.1-201ENST00000425889 474 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.22□□□□□ -1.57
CX3CR1P49238 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC079080.1-201ENST00000479841 822 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CR1P49238 NPM1P21-201ENST00000513394 762 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 MAST4-IT1-201ENST00000514241 658 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.22□□□□□ -1.57
CX3CR1P49238 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC007346.2-201ENST00000564816 892 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AC004232.2-201ENST00000574245 821 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 RN7SL230P-201ENST00000580835 303 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC005479.3-201ENST00000602790 431 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AC073333.2-201ENST00000603589 769 ntBASIC5.22□□□□□ -1.57
CX3CR1P49238 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CR1P49238 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CR1P49238 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CR1P49238 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CR1P49238 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CX3CR1P49238 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CX3CR1P49238 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CX3CR1P49238 AC005005.4-201ENST00000623789 16698 ntBASIC5.21□□□□□ -1.57
CX3CR1P49238 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.21□□□□□ -1.57
CX3CR1P49238 AC130304.1-201ENST00000622942 2385 ntBASIC5.21□□□□□ -1.57
CX3CR1P49238 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 RNA5SP110-201ENST00000362638 115 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 RNA5SP211-201ENST00000365516 117 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC099677.3-201ENST00000427081 395 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CR1P49238 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC010240.2-201ENST00000445363 1205 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 KF459542.1-201ENST00000450908 553 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms