Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HADHAP40939 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.25□□□□□ -1.41
HADHAP40939 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HADHAP40939 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HADHAP40939 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HADHAP40939 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.25□□□□□ -1.41
HADHAP40939 AC092724.1-201ENST00000624623 3397 ntBASIC6.24□□□□□ -1.41
HADHAP40939 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.24□□□□□ -1.41
HADHAP40939 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HADHAP40939 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.24□□□□□ -1.41
HADHAP40939 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.24□□□□□ -1.41
HADHAP40939 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 CXADRP1-201ENST00000398098 1095 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AL157702.1-201ENST00000398764 426 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AL096800.1-201ENST00000405326 893 ntBASIC6.24□□□□□ -1.41
HADHAP40939 MTND2P12-201ENST00000417560 1252 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.24□□□□□ -1.41
HADHAP40939 RCC2P2-201ENST00000422174 918 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AL034379.1-201ENST00000423216 253 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AJ239321.1-201ENST00000424255 564 ntBASIC6.24□□□□□ -1.41
HADHAP40939 RPSAP32-201ENST00000432681 526 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AC094019.1-201ENST00000434678 472 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.24□□□□□ -1.41
HADHAP40939 PPIAP10-201ENST00000438675 458 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AL512637.1-201ENST00000439523 1231 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AL645936.1-201ENST00000441979 518 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.24□□□□□ -1.41
HADHAP40939 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 AC097359.1-201ENST00000447946 463 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 H3F3AP5-201ENST00000475267 429 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AC012123.2-201ENST00000485809 248 ntBASIC6.24□□□□□ -1.41
HADHAP40939 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 ATG10-AS1-201ENST00000504846 648 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.24□□□□□ -1.41
HADHAP40939 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.24□□□□□ -1.41
HADHAP40939 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.24□□□□□ -1.41
HADHAP40939 AC009268.1-201ENST00000561352 1203 ntBASIC6.24□□□□□ -1.41
HADHAP40939 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.24□□□□□ -1.41
HADHAP40939 MIR3154-201ENST00000577829 84 ntBASIC6.24□□□□□ -1.41
HADHAP40939 NPM1P45-201ENST00000583151 559 ntBASIC6.24□□□□□ -1.41
HADHAP40939 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.24□□□□□ -1.41
HADHAP40939 CXADRP3-202ENST00000617265 1100 ntBASIC6.24□□□□□ -1.41
HADHAP40939 AC007842.1-201ENST00000597336 2039 ntBASIC6.24□□□□□ -1.41
HADHAP40939 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 AP001541.1-201ENST00000623322 1904 ntBASIC6.24□□□□□ -1.41
HADHAP40939 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.24□□□□□ -1.41
HADHAP40939 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HADHAP40939 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HADHAP40939 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.24□□□□□ -1.41
HADHAP40939 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HADHAP40939 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HADHAP40939 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.23□□□□□ -1.41
HADHAP40939 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HADHAP40939 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.23□□□□□ -1.41
HADHAP40939 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HADHAP40939 RNU6-386P-201ENST00000362650 107 ntBASIC6.23□□□□□ -1.41
HADHAP40939 SNORD1C-201ENST00000363315 78 ntBASIC6.23□□□□□ -1.41
HADHAP40939 RNU1-49P-201ENST00000363468 159 ntBASIC6.23□□□□□ -1.41
HADHAP40939 RNA5SP346-201ENST00000363541 121 ntBASIC6.23□□□□□ -1.41
HADHAP40939 RNU6-670P-201ENST00000364312 104 ntBASIC6.23□□□□□ -1.41
HADHAP40939 AC083799.1-201ENST00000366451 910 ntBASIC6.23□□□□□ -1.41
HADHAP40939 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HADHAP40939 DHFRP5-201ENST00000406944 564 ntBASIC6.23□□□□□ -1.41
HADHAP40939 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 RN7SKP144-201ENST00000411108 279 ntBASIC6.23□□□□□ -1.41
HADHAP40939 RAB9AP4-201ENST00000415230 609 ntBASIC6.23□□□□□ -1.41
HADHAP40939 RPS7P14-201ENST00000426405 583 ntBASIC6.23□□□□□ -1.41
HADHAP40939 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.23□□□□□ -1.41
HADHAP40939 C1DP3-201ENST00000455013 423 ntBASIC6.23□□□□□ -1.41
HADHAP40939 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 AC091544.1-201ENST00000484702 348 ntBASIC6.23□□□□□ -1.41
HADHAP40939 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.23□□□□□ -1.41
HADHAP40939 AC026616.1-201ENST00000523157 525 ntBASIC6.23□□□□□ -1.41
HADHAP40939 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.23□□□□□ -1.41
HADHAP40939 AP001858.2-201ENST00000536213 601 ntBASIC6.23□□□□□ -1.41
HADHAP40939 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.23□□□□□ -1.41
HADHAP40939 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.23□□□□□ -1.41
HADHAP40939 AC005632.2-201ENST00000564271 828 ntBASIC6.23□□□□□ -1.41
HADHAP40939 AC027229.1-201ENST00000583887 253 ntBASIC6.23□□□□□ -1.41
HADHAP40939 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.23□□□□□ -1.41
HADHAP40939 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.23□□□□□ -1.41
HADHAP40939 uc_338.29-201ENST00000615099 168 ntBASIC6.23□□□□□ -1.41
HADHAP40939 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.23□□□□□ -1.41
HADHAP40939 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HADHAP40939 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms