Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CTNNA1P35221 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
CTNNA1P35221 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CTNNA1P35221 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.34□□□□□ -1.4
CTNNA1P35221 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CTNNA1P35221 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 HSPD1P7-201ENST00000447985 1686 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 AC020656.2-201ENST00000613291 5309 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CTNNA1P35221 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA1P35221 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA1P35221 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CTNNA1P35221 PRELID1P1-201ENST00000403549 660 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 MYL6P5-201ENST00000412707 459 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA1P35221 GAPDHP19-201ENST00000431768 1005 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA1P35221 OR6C72P-201ENST00000451403 892 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA1P35221 PPP1R11P1-201ENST00000486095 376 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA1P35221 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.33□□□□□ -1.4
CTNNA1P35221 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA1P35221 SNORA74.1-201ENST00000516320 180 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA1P35221 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA1P35221 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA1P35221 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA1P35221 AC011270.1-201ENST00000558606 583 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.33□□□□□ -1.4
CTNNA1P35221 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA1P35221 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.33□□□□□ -1.4
CTNNA1P35221 MIR6885-201ENST00000612241 66 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA1P35221 AC089999.3-201ENST00000622440 577 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.33□□□□□ -1.4
CTNNA1P35221 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.33□□□□□ -1.4
CTNNA1P35221 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.33□□□□□ -1.4
CTNNA1P35221 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 NLRP3P1-201ENST00000622303 1785 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CTNNA1P35221 AC239868.2-201ENST00000564237 4527 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA1P35221 AC022325.1-201ENST00000502748 2199 ntBASIC6.33□□□□□ -1.4
CTNNA1P35221 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA1P35221 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 SAMM50P1-201ENST00000455403 1399 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 THAP12P9-201ENST00000503971 2360 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 AL355488.2-201ENST00000609909 2850 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AL161912.4-201ENST00000623889 2468 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CTNNA1P35221 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 SNORA64.3-201ENST00000365647 134 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CTNNA1P35221 RAB5CP1-201ENST00000395972 580 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 RN7SKP144-201ENST00000411108 279 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.32□□□□□ -1.4
CTNNA1P35221 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA1P35221 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA1P35221 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.32□□□□□ -1.4
CTNNA1P35221 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 PPIAP32-201ENST00000449940 472 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 SDC4P-201ENST00000453285 601 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 Z83838.1-202ENST00000456225 839 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AC095052.1-201ENST00000509955 863 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AC097486.1-201ENST00000515331 210 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AC021269.1-201ENST00000526860 705 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AL122023.1-201ENST00000622847 530 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 AC025262.3-201ENST00000623666 360 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms