Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC074087.1-201ENST00000512059 724 ntBASIC9.23□□□□□ -0.93
CLIP1P30622 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC9.23□□□□□ -0.93
CLIP1P30622 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CLIP1P30622 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC9.23□□□□□ -0.93
CLIP1P30622 AC096996.1-201ENST00000563813 325 ntBASIC9.23□□□□□ -0.93
CLIP1P30622 IMMP1LP3-201ENST00000604197 224 ntBASIC9.23□□□□□ -0.93
CLIP1P30622 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC9.23□□□□□ -0.93
CLIP1P30622 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC9.23□□□□□ -0.93
CLIP1P30622 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.23□□□□□ -0.93
CLIP1P30622 MRE11P1-201ENST00000464884 2127 ntBASIC9.23□□□□□ -0.93
CLIP1P30622 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC9.23□□□□□ -0.93
CLIP1P30622 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CLIP1P30622 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CLIP1P30622 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CLIP1P30622 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CLIP1P30622 CPS1-IT1-201ENST00000628368 2306 ntBASIC9.23□□□□□ -0.93
CLIP1P30622 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CLIP1P30622 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CLIP1P30622 AC078880.4-201ENST00000617627 1749 ntBASIC9.23□□□□□ -0.93
CLIP1P30622 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 FMO7P-201ENST00000436045 768 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CLIP1P30622 AL163193.1-201ENST00000444895 788 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC9.22□□□□□ -0.93
CLIP1P30622 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC9.22□□□□□ -0.93
CLIP1P30622 AC099521.1-201ENST00000482557 334 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 SMARCE1P3-201ENST00000553649 1231 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC9.22□□□□□ -0.93
CLIP1P30622 MIR1273E-201ENST00000581165 102 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 FO393422.1-201ENST00000603908 708 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 AC018445.2-201ENST00000622987 260 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CLIP1P30622 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CLIP1P30622 IMMTP1-201ENST00000435590 2219 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 MFSD8-239ENST00000641590 2479 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC9.22□□□□□ -0.93
CLIP1P30622 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CLIP1P30622 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CLIP1P30622 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CLIP1P30622 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CLIP1P30622 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC9.22□□□□□ -0.93
CLIP1P30622 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CLIP1P30622 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
CLIP1P30622 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC9.22□□□□□ -0.93
CLIP1P30622 NPM1P4-201ENST00000414095 812 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 AC019205.1-201ENST00000421830 730 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 AC113412.1-201ENST00000425840 504 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 EIF3LP3-201ENST00000495197 822 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 SCARNA6.1-201ENST00000516989 238 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 MIR4505-201ENST00000582238 73 ntBASIC9.22□□□□□ -0.93
CLIP1P30622 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC9.22□□□□□ -0.93
CLIP1P30622 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC9.22□□□□□ -0.93
CLIP1P30622 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
CLIP1P30622 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CLIP1P30622 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
CLIP1P30622 SRRM1P3-201ENST00000426911 2678 ntBASIC9.21□□□□□ -0.93
CLIP1P30622 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.21□□□□□ -0.93
CLIP1P30622 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
CLIP1P30622 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CLIP1P30622 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CLIP1P30622 LINC02019-201ENST00000608605 2060 ntBASIC9.21□□□□□ -0.94
CLIP1P30622 MELK-211ENST00000545008 2236 ntTSL 2 BASIC9.21□□□□□ -0.94
CLIP1P30622 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.21□□□□□ -0.94
CLIP1P30622 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CLIP1P30622 RN7SKP162-201ENST00000363605 345 ntBASIC9.21□□□□□ -0.94
CLIP1P30622 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
CLIP1P30622 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.21□□□□□ -0.94
CLIP1P30622 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.21□□□□□ -0.94
CLIP1P30622 RN7SL515P-201ENST00000463999 297 ntBASIC9.21□□□□□ -0.94
CLIP1P30622 IGBP1P1-201ENST00000554337 1009 ntBASIC9.21□□□□□ -0.94
CLIP1P30622 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC9.21□□□□□ -0.94
CLIP1P30622 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC9.21□□□□□ -0.94
CLIP1P30622 OR7A1P-201ENST00000601206 970 ntBASIC9.21□□□□□ -0.94
CLIP1P30622 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
CLIP1P30622 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CLIP1P30622 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CLIP1P30622 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CLIP1P30622 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
CLIP1P30622 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC9.2□□□□□ -0.94
CLIP1P30622 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
CLIP1P30622 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.2□□□□□ -0.94
CLIP1P30622 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC9.2□□□□□ -0.94
CLIP1P30622 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms