Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN6P29350 RNA5SP375-201ENST00000362975 119 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 RNU105B-201ENST00000364478 208 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 RN7SKP108-201ENST00000411367 328 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN6P29350 RPS15AP30-201ENST00000420976 390 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN6P29350 PRUNEP1-201ENST00000425846 705 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN6P29350 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN6P29350 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 AC124945.1-201ENST00000485133 188 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AP002453.1-201ENST00000492327 668 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 SNORA81.2-201ENST00000516868 170 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN6P29350 AC084121.1-201ENST00000533882 835 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 AC008126.1-201ENST00000549019 480 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN6P29350 AC026826.3-201ENST00000561747 158 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AC002519.2-203ENST00000567043 837 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AP001357.1-201ENST00000586304 1053 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN6P29350 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN6P29350 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 AC020633.1-201ENST00000468439 2247 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN6P29350 AC011503.2-201ENST00000594230 1500 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.71□□□□□ -1.49
PTPN6P29350 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PTPN6P29350 GTF2IP4-201ENST00000453092 2054 ntBASIC5.71□□□□□ -1.49
PTPN6P29350 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTPN6P29350 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN6P29350 AC119674.1-202ENST00000641333 1860 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 AL359955.1-201ENST00000455242 3275 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 AP000432.2-201ENST00000624164 2048 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PTPN6P29350 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN6P29350 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN6P29350 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN6P29350 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN6P29350 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN6P29350 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN6P29350 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN6P29350 SNORA11.3-201ENST00000408471 128 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN6P29350 DPPA2P2-201ENST00000418220 897 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN6P29350 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN6P29350 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN6P29350 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN6P29350 CUBNP2-201ENST00000443534 1139 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 RPL5P7-201ENST00000444235 813 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN6P29350 AL590004.3-202ENST00000445883 451 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 HMGB1P7-201ENST00000450921 612 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 SDC4P-201ENST00000453285 601 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN6P29350 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
PTPN6P29350 RN7SL170P-201ENST00000487098 295 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 RPL12P30-201ENST00000488389 499 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 CCDC11P1-201ENST00000503137 1162 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 MAST4-IT1-201ENST00000514241 658 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 snoU109.5-201ENST00000516231 132 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 AC011853.1-201ENST00000518911 454 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN6P29350 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN6P29350 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 AL845552.1-201ENST00000556820 323 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN6P29350 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 AC010547.7-201ENST00000570323 333 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 MIR4502-201ENST00000580432 81 ntBASIC5.71□□□□□ -1.5
PTPN6P29350 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN6P29350 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms