Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PDGFRAP16234 CUBNP2-201ENST00000443534 1139 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 HMGN1P2-201ENST00000445197 310 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFRAP16234 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFRAP16234 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFRAP16234 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFRAP16234 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFRAP16234 SUMO2P19-201ENST00000518920 295 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFRAP16234 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFRAP16234 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFRAP16234 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFRAP16234 AC090826.1-203ENST00000569235 490 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 AC008507.3-201ENST00000585753 472 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFRAP16234 AC068768.2-201ENST00000602352 343 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFRAP16234 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PDGFRAP16234 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFRAP16234 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AL591135.1-201ENST00000401578 5914 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PDGFRAP16234 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFRAP16234 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFRAP16234 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 RNU1-59P-201ENST00000364829 162 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 NMD3P2-201ENST00000421815 761 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 ZNF101P1-201ENST00000435701 1720 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 ATP5LP2-201ENST00000440646 311 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 SDC4P-201ENST00000453285 601 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 PPIAP27-201ENST00000453800 265 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 AC023194.2-201ENST00000465398 406 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 SUMO2P4-201ENST00000504193 276 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AC008627.1-201ENST00000517511 1704 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AC079905.1-201ENST00000549280 475 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 AL049779.3-201ENST00000557141 606 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 AC016839.1-201ENST00000578162 867 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 U1.25-201ENST00000614085 162 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 U1.34-201ENST00000618578 162 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 U1.31-201ENST00000620022 160 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFRAP16234 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFRAP16234 MIR1910-201ENST00000636955 80 ntBASIC6.29□□□□□ -1.4
PDGFRAP16234 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFRAP16234 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFRAP16234 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFRAP16234 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFRAP16234 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFRAP16234 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFRAP16234 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFRAP16234 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFRAP16234 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFRAP16234 AC027279.1-201ENST00000568885 4284 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFRAP16234 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 THAP12P9-201ENST00000503971 2360 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 RNA5SP514-201ENST00000363717 111 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 RN7SKP275-201ENST00000364626 301 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 SNRPEP6-201ENST00000407465 277 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 MIR1282-201ENST00000408865 101 ntBASIC6.28□□□□□ -1.4
PDGFRAP16234 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFRAP16234 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms