Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC9.74□□□□□ -0.85
CFTRP13569 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC9.74□□□□□ -0.85
CFTRP13569 AC079922.1-201ENST00000443291 359 ntBASIC9.74□□□□□ -0.85
CFTRP13569 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC9.74□□□□□ -0.85
CFTRP13569 AC009220.1-201ENST00000451614 275 ntBASIC9.74□□□□□ -0.85
CFTRP13569 RN7SL346P-201ENST00000491561 294 ntBASIC9.74□□□□□ -0.85
CFTRP13569 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC9.74□□□□□ -0.85
CFTRP13569 RN7SKP288-201ENST00000516227 268 ntBASIC9.74□□□□□ -0.85
CFTRP13569 MIR2117-201ENST00000516780 80 ntBASIC9.74□□□□□ -0.85
CFTRP13569 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.74□□□□□ -0.85
CFTRP13569 MIR4480-201ENST00000582492 71 ntBASIC9.74□□□□□ -0.85
CFTRP13569 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
CFTRP13569 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9.74□□□□□ -0.85
CFTRP13569 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
CFTRP13569 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.74□□□□□ -0.85
CFTRP13569 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
CFTRP13569 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.73□□□□□ -0.85
CFTRP13569 RAB28P1-201ENST00000411517 641 ntBASIC9.73□□□□□ -0.85
CFTRP13569 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.73□□□□□ -0.85
CFTRP13569 AC096775.1-201ENST00000437724 448 ntBASIC9.73□□□□□ -0.85
CFTRP13569 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC9.73□□□□□ -0.85
CFTRP13569 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.73□□□□□ -0.85
CFTRP13569 AC069307.1-201ENST00000602820 447 ntBASIC9.73□□□□□ -0.85
CFTRP13569 MIR378J-201ENST00000611988 109 ntBASIC9.73□□□□□ -0.85
CFTRP13569 AC109583.2-201ENST00000617367 129 ntBASIC9.73□□□□□ -0.85
CFTRP13569 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC9.73□□□□□ -0.85
CFTRP13569 AL353763.1-201ENST00000624467 1628 ntBASIC9.73□□□□□ -0.85
CFTRP13569 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.73□□□□□ -0.85
CFTRP13569 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
CFTRP13569 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.73□□□□□ -0.85
CFTRP13569 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
CFTRP13569 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
CFTRP13569 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
CFTRP13569 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
CFTRP13569 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CFTRP13569 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CFTRP13569 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC9.72□□□□□ -0.85
CFTRP13569 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.72□□□□□ -0.85
CFTRP13569 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC9.72□□□□□ -0.85
CFTRP13569 RPS11P7-201ENST00000442125 465 ntBASIC9.72□□□□□ -0.85
CFTRP13569 RPS3AP41-201ENST00000462701 778 ntBASIC9.72□□□□□ -0.85
CFTRP13569 AC083982.1-201ENST00000485679 344 ntBASIC9.72□□□□□ -0.85
CFTRP13569 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC9.72□□□□□ -0.85
CFTRP13569 RNU6-941P-201ENST00000516346 108 ntBASIC9.72□□□□□ -0.85
CFTRP13569 MAL2-208ENST00000523307 556 ntTSL 4 BASIC9.72□□□□□ -0.85
CFTRP13569 BMPR1APS2-201ENST00000527904 1012 ntBASIC9.72□□□□□ -0.85
CFTRP13569 AC090424.1-201ENST00000535243 736 ntBASIC9.72□□□□□ -0.85
CFTRP13569 AL049779.3-201ENST00000557141 606 ntBASIC9.72□□□□□ -0.85
CFTRP13569 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.72□□□□□ -0.85
CFTRP13569 AC106730.2-201ENST00000566641 540 ntBASIC9.72□□□□□ -0.85
CFTRP13569 MIR132-201ENST00000591554 101 ntBASIC9.72□□□□□ -0.85
CFTRP13569 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC9.72□□□□□ -0.85
CFTRP13569 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC9.72□□□□□ -0.85
CFTRP13569 IGLCOR22-2-201ENST00000605398 313 ntBASIC9.72□□□□□ -0.85
CFTRP13569 AC090607.5-201ENST00000615692 224 ntBASIC9.72□□□□□ -0.85
CFTRP13569 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CFTRP13569 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CFTRP13569 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CFTRP13569 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC9.72□□□□□ -0.85
CFTRP13569 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CFTRP13569 AC011493.1-201ENST00000596753 1632 ntBASIC9.72□□□□□ -0.85
CFTRP13569 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CFTRP13569 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CFTRP13569 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
CFTRP13569 AC006213.6-201ENST00000623722 4179 ntBASIC9.72□□□□□ -0.85
CFTRP13569 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CFTRP13569 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.72□□□□□ -0.85
CFTRP13569 SNORA67-201ENST00000384423 137 ntBASIC9.72□□□□□ -0.85
CFTRP13569 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC9.72□□□□□ -0.85
CFTRP13569 RN7SKP151-201ENST00000410230 316 ntBASIC9.72□□□□□ -0.85
CFTRP13569 RBMY2QP-201ENST00000429799 1147 ntBASIC9.72□□□□□ -0.85
CFTRP13569 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.72□□□□□ -0.85
CFTRP13569 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.72□□□□□ -0.85
CFTRP13569 AC020765.1-201ENST00000604296 328 ntBASIC9.72□□□□□ -0.85
CFTRP13569 WWOX-217ENST00000620008 450 ntTSL 2 BASIC9.72□□□□□ -0.85
CFTRP13569 AL034549.2-201ENST00000618285 3373 ntBASIC9.71□□□□□ -0.85
CFTRP13569 TMEM75-201ENST00000624314 2165 ntBASIC9.71□□□□□ -0.85
CFTRP13569 AC008957.3-201ENST00000624112 2242 ntBASIC9.71□□□□□ -0.85
CFTRP13569 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC9.71□□□□□ -0.85
CFTRP13569 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
CFTRP13569 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC9.71□□□□□ -0.85
CFTRP13569 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.85
CFTRP13569 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CFTRP13569 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CFTRP13569 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.71□□□□□ -0.86
CFTRP13569 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.71□□□□□ -0.86
CFTRP13569 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CFTRP13569 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms