Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.53□□□□□ -1.36
COL11A1P12107 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL11A1P12107 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL11A1P12107 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.53□□□□□ -1.36
COL11A1P12107 METTL15P3-201ENST00000415522 1221 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC005033.1-201ENST00000428904 813 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 AL731534.1-201ENST00000434711 269 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 OR6D1P-201ENST00000436165 939 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 CYCSP12-201ENST00000437729 300 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.53□□□□□ -1.36
COL11A1P12107 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.53□□□□□ -1.36
COL11A1P12107 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.53□□□□□ -1.36
COL11A1P12107 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC012616.1-201ENST00000600294 197 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.53□□□□□ -1.36
COL11A1P12107 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.53□□□□□ -1.36
COL11A1P12107 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.53□□□□□ -1.36
COL11A1P12107 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.53□□□□□ -1.36
COL11A1P12107 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.53□□□□□ -1.36
COL11A1P12107 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.53□□□□□ -1.36
COL11A1P12107 OR2AO1P-201ENST00000476497 403 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.53□□□□□ -1.36
COL11A1P12107 SNORA26.10-201ENST00000516427 141 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.53□□□□□ -1.36
COL11A1P12107 AC126615.2-201ENST00000553003 515 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.53□□□□□ -1.36
COL11A1P12107 RBM22P12-201ENST00000567098 1255 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.53□□□□□ -1.36
COL11A1P12107 AL445222.1-201ENST00000607259 628 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 AL512329.2-201ENST00000607350 548 ntBASIC6.53□□□□□ -1.36
COL11A1P12107 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.53□□□□□ -1.36
COL11A1P12107 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL11A1P12107 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
COL11A1P12107 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
COL11A1P12107 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL11A1P12107 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 NENFP1-201ENST00000419476 466 ntBASIC6.52□□□□□ -1.37
COL11A1P12107 AC007394.1-201ENST00000421941 531 ntBASIC6.52□□□□□ -1.37
COL11A1P12107 NIPA2P1-201ENST00000426223 976 ntBASIC6.52□□□□□ -1.37
COL11A1P12107 RN7SL172P-201ENST00000460535 303 ntBASIC6.52□□□□□ -1.37
COL11A1P12107 AL603882.1-201ENST00000463059 681 ntBASIC6.52□□□□□ -1.37
COL11A1P12107 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.52□□□□□ -1.37
COL11A1P12107 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.52□□□□□ -1.37
COL11A1P12107 DPPA3P2-202ENST00000557188 1219 ntBASIC6.52□□□□□ -1.37
COL11A1P12107 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.52□□□□□ -1.37
COL11A1P12107 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.52□□□□□ -1.37
COL11A1P12107 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.52□□□□□ -1.37
COL11A1P12107 AC000068.2-201ENST00000608816 460 ntBASIC6.52□□□□□ -1.37
COL11A1P12107 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.52□□□□□ -1.37
COL11A1P12107 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.52□□□□□ -1.37
COL11A1P12107 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.52□□□□□ -1.37
COL11A1P12107 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
COL11A1P12107 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL11A1P12107 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL11A1P12107 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL11A1P12107 GAPDHP24-201ENST00000328713 983 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms