Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC4.9□□□□□ -1.63
CTSDP07339 CASC19-246ENST00000641625 1606 ntBASIC4.9□□□□□ -1.63
CTSDP07339 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CTSDP07339 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 AC217777.1-201ENST00000570034 1471 ntBASIC4.89□□□□□ -1.63
CTSDP07339 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 AC097063.1-201ENST00000426714 1797 ntBASIC4.89□□□□□ -1.63
CTSDP07339 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 RN7SKP69-201ENST00000365390 305 ntBASIC4.89□□□□□ -1.63
CTSDP07339 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 MIR551B-201ENST00000384984 96 ntBASIC4.89□□□□□ -1.63
CTSDP07339 RNA5SP91-201ENST00000390902 119 ntBASIC4.89□□□□□ -1.63
CTSDP07339 AC121334.1-201ENST00000396414 802 ntBASIC4.89□□□□□ -1.63
CTSDP07339 AC003045.1-201ENST00000398779 713 ntBASIC4.89□□□□□ -1.63
CTSDP07339 OSTCP4-201ENST00000424397 449 ntBASIC4.89□□□□□ -1.63
CTSDP07339 RPL12P12-201ENST00000424633 501 ntBASIC4.89□□□□□ -1.63
CTSDP07339 VN1R21P-201ENST00000426703 765 ntBASIC4.89□□□□□ -1.63
CTSDP07339 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 GAPDHP75-201ENST00000433910 943 ntBASIC4.89□□□□□ -1.63
CTSDP07339 AC094019.1-201ENST00000434678 472 ntBASIC4.89□□□□□ -1.63
CTSDP07339 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CTSDP07339 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 AL356121.1-201ENST00000442911 156 ntBASIC4.89□□□□□ -1.63
CTSDP07339 AC097359.1-201ENST00000447946 463 ntBASIC4.89□□□□□ -1.63
CTSDP07339 RN7SL393P-201ENST00000463588 296 ntBASIC4.89□□□□□ -1.63
CTSDP07339 RPL34P33-201ENST00000486062 334 ntBASIC4.89□□□□□ -1.63
CTSDP07339 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.89□□□□□ -1.63
CTSDP07339 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.89□□□□□ -1.63
CTSDP07339 MIR6133-201ENST00000617057 108 ntBASIC4.89□□□□□ -1.63
CTSDP07339 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 AC007603.3-201ENST00000636915 979 ntBASIC4.89□□□□□ -1.63
CTSDP07339 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.89□□□□□ -1.63
CTSDP07339 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTSDP07339 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 RBMY1HP-201ENST00000382759 1389 ntBASIC4.89□□□□□ -1.63
CTSDP07339 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.89□□□□□ -1.63
CTSDP07339 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.89□□□□□ -1.63
CTSDP07339 AL137058.3-201ENST00000624531 3099 ntBASIC4.88□□□□□ -1.63
CTSDP07339 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTSDP07339 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTSDP07339 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTSDP07339 AC006600.2-201ENST00000624834 2506 ntBASIC4.88□□□□□ -1.63
CTSDP07339 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.88□□□□□ -1.63
CTSDP07339 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTSDP07339 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTSDP07339 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 RN7SKP78-201ENST00000364711 318 ntBASIC4.88□□□□□ -1.63
CTSDP07339 RNA5SP85-201ENST00000365378 119 ntBASIC4.88□□□□□ -1.63
CTSDP07339 RNU1-136P-201ENST00000384181 164 ntBASIC4.88□□□□□ -1.63
CTSDP07339 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.88□□□□□ -1.63
CTSDP07339 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.88□□□□□ -1.63
CTSDP07339 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 OR10T1P-201ENST00000424327 947 ntBASIC4.88□□□□□ -1.63
CTSDP07339 BX119904.3-201ENST00000428194 957 ntBASIC4.88□□□□□ -1.63
CTSDP07339 GAPDHP19-201ENST00000431768 1005 ntBASIC4.88□□□□□ -1.63
CTSDP07339 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.88□□□□□ -1.63
CTSDP07339 AC092601.1-201ENST00000444526 383 ntBASIC4.88□□□□□ -1.63
CTSDP07339 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.88□□□□□ -1.63
CTSDP07339 RNU1-88P-201ENST00000459274 128 ntBASIC4.88□□□□□ -1.63
CTSDP07339 DEFB109A-201ENST00000482450 265 ntBASIC4.88□□□□□ -1.63
CTSDP07339 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.88□□□□□ -1.63
CTSDP07339 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.88□□□□□ -1.63
CTSDP07339 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.88□□□□□ -1.63
CTSDP07339 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.88□□□□□ -1.63
CTSDP07339 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.88□□□□□ -1.63
CTSDP07339 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTSDP07339 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.88□□□□□ -1.63
CTSDP07339 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.88□□□□□ -1.63
CTSDP07339 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.88□□□□□ -1.63
CTSDP07339 AC068726.1-201ENST00000610993 341 ntBASIC4.88□□□□□ -1.63
CTSDP07339 AC016590.3-201ENST00000611171 753 ntBASIC4.88□□□□□ -1.63
CTSDP07339 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTSDP07339 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms