Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP001823.1-201ENST00000604056 1003 ntBASIC6.59□□□□□ -1.35
TPM3P06753 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM3P06753 AC099654.11-201ENST00000638857 294 ntBASIC6.59□□□□□ -1.35
TPM3P06753 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM3P06753 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TPM3P06753 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
TPM3P06753 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
TPM3P06753 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TPM3P06753 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.59□□□□□ -1.36
TPM3P06753 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM3P06753 AC116158.1-201ENST00000560231 2129 ntBASIC6.58□□□□□ -1.36
TPM3P06753 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM3P06753 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TPM3P06753 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM3P06753 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM3P06753 AC092634.1-201ENST00000366505 199 ntBASIC6.58□□□□□ -1.36
TPM3P06753 AC121334.1-201ENST00000396414 802 ntBASIC6.58□□□□□ -1.36
TPM3P06753 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM3P06753 AL158214.1-201ENST00000444423 404 ntBASIC6.58□□□□□ -1.36
TPM3P06753 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM3P06753 RN7SL83P-201ENST00000468131 297 ntBASIC6.58□□□□□ -1.36
TPM3P06753 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM3P06753 PFN1P6-201ENST00000476786 399 ntBASIC6.58□□□□□ -1.36
TPM3P06753 RN7SL104P-201ENST00000498686 293 ntBASIC6.58□□□□□ -1.36
TPM3P06753 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM3P06753 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.58□□□□□ -1.36
TPM3P06753 AC135983.3-201ENST00000528049 1226 ntBASIC6.58□□□□□ -1.36
TPM3P06753 AC124891.1-201ENST00000536322 519 ntBASIC6.58□□□□□ -1.36
TPM3P06753 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM3P06753 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM3P06753 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM3P06753 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM3P06753 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM3P06753 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM3P06753 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM3P06753 AC023206.1-201ENST00000605824 298 ntBASIC6.58□□□□□ -1.36
TPM3P06753 NANOGP3-201ENST00000605855 286 ntBASIC6.58□□□□□ -1.36
TPM3P06753 AL445670.1-201ENST00000618889 801 ntBASIC6.58□□□□□ -1.36
TPM3P06753 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM3P06753 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM3P06753 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM3P06753 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
TPM3P06753 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
TPM3P06753 MAPK10-338ENST00000641647 3362 ntBASIC6.58□□□□□ -1.36
TPM3P06753 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM3P06753 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM3P06753 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM3P06753 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TPM3P06753 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TPM3P06753 U3.7-201ENST00000363668 216 ntBASIC6.57□□□□□ -1.36
TPM3P06753 RNA5SP211-201ENST00000365516 117 ntBASIC6.57□□□□□ -1.36
TPM3P06753 SNORA70.6-201ENST00000383934 134 ntBASIC6.57□□□□□ -1.36
TPM3P06753 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TPM3P06753 AC003045.1-201ENST00000398779 713 ntBASIC6.57□□□□□ -1.36
TPM3P06753 SSR1P1-201ENST00000407630 814 ntBASIC6.57□□□□□ -1.36
TPM3P06753 RNA5SP431-201ENST00000410312 120 ntBASIC6.57□□□□□ -1.36
TPM3P06753 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM3P06753 OR10T1P-201ENST00000424327 947 ntBASIC6.57□□□□□ -1.36
TPM3P06753 RPL12P12-201ENST00000424633 501 ntBASIC6.57□□□□□ -1.36
TPM3P06753 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM3P06753 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM3P06753 COX4I1P2-201ENST00000447446 547 ntBASIC6.57□□□□□ -1.36
TPM3P06753 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM3P06753 AC016027.4-201ENST00000450866 277 ntBASIC6.57□□□□□ -1.36
TPM3P06753 SDC4P-201ENST00000453285 601 ntBASIC6.57□□□□□ -1.36
TPM3P06753 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 RN7SL655P-201ENST00000486087 298 ntBASIC6.57□□□□□ -1.36
TPM3P06753 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.57□□□□□ -1.36
TPM3P06753 AC134698.1-201ENST00000511619 643 ntBASIC6.57□□□□□ -1.36
TPM3P06753 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM3P06753 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM3P06753 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM3P06753 MIR378H-201ENST00000579966 83 ntBASIC6.57□□□□□ -1.36
TPM3P06753 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM3P06753 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM3P06753 AC036176.3-201ENST00000602456 418 ntBASIC6.57□□□□□ -1.36
TPM3P06753 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM3P06753 uc_338.26-201ENST00000612659 160 ntBASIC6.57□□□□□ -1.36
TPM3P06753 MIR6503-201ENST00000622884 86 ntBASIC6.57□□□□□ -1.36
TPM3P06753 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM3P06753 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.57□□□□□ -1.36
TPM3P06753 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TPM3P06753 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TPM3P06753 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM3P06753 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
TPM3P06753 PARP4P2-201ENST00000446672 3326 ntBASIC6.56□□□□□ -1.36
TPM3P06753 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM3P06753 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM3P06753 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM3P06753 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM3P06753 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM3P06753 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM3P06753 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM3P06753 AL033519.1-201ENST00000407266 307 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms