Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 MIR138-2-201ENST00000384916 84 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AL353151.1-201ENST00000402406 604 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 ZNF37CP-201ENST00000406795 241 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 PIGPP2-201ENST00000411569 458 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AL139135.1-201ENST00000412675 209 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 RPL31P54-201ENST00000429803 370 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 DDX11L10-201ENST00000430178 571 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.22□□□□□ -1.25
PDGFAP04085 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 CDC42P2-201ENST00000448566 569 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC110749.1-201ENST00000462007 357 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AL603882.1-201ENST00000463059 681 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
PDGFAP04085 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 RPL7L1P4-201ENST00000513004 707 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 RNU6-506P-201ENST00000516553 94 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC092709.1-201ENST00000521355 1045 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 NF1P12-201ENST00000549593 583 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 CHCHD3P2-201ENST00000550751 639 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 SNORA59B-202ENST00000578183 701 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC005262.1-201ENST00000588562 362 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 AL078624.2-201ENST00000605063 554 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AL109936.2-201ENST00000605350 650 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC023310.4-201ENST00000613130 650 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AL353726.1-201ENST00000614041 1000 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC090517.2-201ENST00000614966 680 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC005840.5-201ENST00000619166 599 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AL121985.3-201ENST00000620690 523 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 AC012414.7-202ENST00000622705 1090 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 AC012557.3-201ENST00000626439 255 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PDGFAP04085 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 PSMC1P7-201ENST00000495689 1315 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDGFAP04085 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PDGFAP04085 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.21□□□□□ -1.25
PDGFAP04085 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.21□□□□□ -1.25
PDGFAP04085 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDGFAP04085 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDGFAP04085 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDGFAP04085 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.21□□□□□ -1.25
PDGFAP04085 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
PDGFAP04085 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDGFAP04085 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDGFAP04085 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.21□□□□□ -1.25
PDGFAP04085 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.21□□□□□ -1.25
PDGFAP04085 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC7.21□□□□□ -1.25
PDGFAP04085 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 AL589993.1-201ENST00000407450 2524 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
PDGFAP04085 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.21□□□□□ -1.26
PDGFAP04085 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 RNU6-666P-201ENST00000363499 107 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 AC006511.2-201ENST00000388966 660 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 RNA5SP498-201ENST00000411342 120 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AC016831.2-201ENST00000417179 352 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 CDC42P6-201ENST00000421246 576 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.21□□□□□ -1.26
PDGFAP04085 AL034379.1-201ENST00000423216 253 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms