Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.51□□□□□ -1.37
CHRNA1P02708 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.51□□□□□ -1.37
CHRNA1P02708 AL034374.2-201ENST00000605281 548 ntBASIC6.51□□□□□ -1.37
CHRNA1P02708 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.51□□□□□ -1.37
CHRNA1P02708 RN7SL544P-201ENST00000617232 284 ntBASIC6.51□□□□□ -1.37
CHRNA1P02708 RN7SL763P-201ENST00000620922 284 ntBASIC6.51□□□□□ -1.37
CHRNA1P02708 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CHRNA1P02708 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.51□□□□□ -1.37
CHRNA1P02708 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.51□□□□□ -1.37
CHRNA1P02708 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.51□□□□□ -1.37
CHRNA1P02708 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CHRNA1P02708 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CHRNA1P02708 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.51□□□□□ -1.37
CHRNA1P02708 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA1P02708 CCNT2P1-201ENST00000423082 1315 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 MTND5P12-201ENST00000502851 1449 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 AC016583.1-201ENST00000624221 2431 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 AL078595.2-201ENST00000605309 1780 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 AL355377.1-201ENST00000621125 1653 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHRNA1P02708 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 RNA5SP46-201ENST00000362370 120 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 RNA5SP132-201ENST00000364725 118 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CHRNA1P02708 NPM1P38-201ENST00000403835 865 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 RPS4XP5-201ENST00000419038 768 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA1P02708 EIF3LP3-201ENST00000495197 822 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 RN7SL466P-201ENST00000497546 295 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 AC138866.2-201ENST00000508650 584 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 TPM3P3-201ENST00000521343 354 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.5□□□□□ -1.37
CHRNA1P02708 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 AC119501.1-201ENST00000603646 475 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA1P02708 uc_338.26-201ENST00000612659 160 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 AC022919.1-201ENST00000624979 626 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHRNA1P02708 NCOA4P2-201ENST00000340589 1813 ntBASIC6.5□□□□□ -1.37
CHRNA1P02708 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA1P02708 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA1P02708 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA1P02708 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CHRNA1P02708 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.49□□□□□ -1.37
CHRNA1P02708 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CHRNA1P02708 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.49□□□□□ -1.37
CHRNA1P02708 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 RPL7P58-201ENST00000402913 758 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 BMS1P17-202ENST00000416720 316 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 AK4P4-201ENST00000419465 646 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.49□□□□□ -1.37
CHRNA1P02708 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 LRRC37A14P-201ENST00000452297 462 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 RN7SL352P-201ENST00000466002 277 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 RPS17P15-201ENST00000475609 349 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA1P02708 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.49□□□□□ -1.37
CHRNA1P02708 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA1P02708 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.49□□□□□ -1.37
CHRNA1P02708 MIR4443-201ENST00000585052 53 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 AC013244.1-201ENST00000604279 193 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 AP000864.1-201ENST00000609424 650 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 AL691477.1-201ENST00000624398 162 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.49□□□□□ -1.37
CHRNA1P02708 OR11H2-202ENST00000641517 1085 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 LINC01616-201ENST00000561816 2280 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA1P02708 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CHRNA1P02708 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms