Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.68□□□□□ -1.5
CLPTM1O96005 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.68□□□□□ -1.5
CLPTM1O96005 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLPTM1O96005 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 DDX18P6-201ENST00000450119 1997 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLPTM1O96005 RN7SKP185-201ENST00000362813 326 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AL034417.1-201ENST00000399343 800 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 RANP6-201ENST00000413691 644 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC244453.4-201ENST00000419150 388 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 UBBP5-201ENST00000446970 266 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.68□□□□□ -1.5
CLPTM1O96005 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLPTM1O96005 PDCL3P4-201ENST00000489621 720 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AC114324.2-202ENST00000503812 134 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AC138409.2-202ENST00000507274 458 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.68□□□□□ -1.5
CLPTM1O96005 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.68□□□□□ -1.5
CLPTM1O96005 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.68□□□□□ -1.5
CLPTM1O96005 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 MIR4660-201ENST00000583549 74 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC020916.2-201ENST00000591242 360 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AC245052.7-201ENST00000601161 359 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AC007786.3-201ENST00000615154 596 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AC015712.7-201ENST00000615211 635 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.68□□□□□ -1.5
CLPTM1O96005 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 AC068213.1-201ENST00000625124 226 ntBASIC5.68□□□□□ -1.5
CLPTM1O96005 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLPTM1O96005 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.68□□□□□ -1.5
CLPTM1O96005 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLPTM1O96005 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.67□□□□□ -1.5
CLPTM1O96005 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.67□□□□□ -1.5
CLPTM1O96005 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.67□□□□□ -1.5
CLPTM1O96005 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLPTM1O96005 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 RN7SKP184-201ENST00000362348 333 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 RNA5SP85-201ENST00000365378 119 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.67□□□□□ -1.5
CLPTM1O96005 VN1R3-201ENST00000418822 919 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC006455.6-201ENST00000426192 893 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 SEPT7P3-201ENST00000455017 621 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC073594.1-201ENST00000462065 364 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 RPSAP51-201ENST00000497462 645 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC131392.1-201ENST00000506490 633 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC093664.1-201ENST00000511779 289 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.67□□□□□ -1.5
CLPTM1O96005 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLPTM1O96005 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.67□□□□□ -1.5
CLPTM1O96005 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.67□□□□□ -1.5
CLPTM1O96005 RN7SL208P-201ENST00000577964 296 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC027229.1-201ENST00000583887 253 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC018809.2-201ENST00000602436 3823 ntBASIC5.67□□□□□ -1.5
CLPTM1O96005 AC006924.1-201ENST00000610750 559 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms