Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.15□□□□□ -1.26
MBD4O95243 RPL23AP40-201ENST00000487630 390 ntBASIC7.15□□□□□ -1.26
MBD4O95243 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.15□□□□□ -1.26
MBD4O95243 RNA5SP271-201ENST00000516700 88 ntBASIC7.15□□□□□ -1.26
MBD4O95243 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.15□□□□□ -1.26
MBD4O95243 IGKV2-4-201ENST00000523070 340 ntBASIC7.15□□□□□ -1.26
MBD4O95243 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.15□□□□□ -1.26
MBD4O95243 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.15□□□□□ -1.26
MBD4O95243 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.15□□□□□ -1.26
MBD4O95243 AC100767.2-201ENST00000604840 693 ntBASIC7.15□□□□□ -1.26
MBD4O95243 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.15□□□□□ -1.26
MBD4O95243 AL162377.2-201ENST00000624532 337 ntBASIC7.15□□□□□ -1.26
MBD4O95243 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.15□□□□□ -1.26
MBD4O95243 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
MBD4O95243 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
MBD4O95243 MTCO1P22-201ENST00000604619 1360 ntBASIC7.15□□□□□ -1.26
MBD4O95243 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MBD4O95243 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
MBD4O95243 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.15□□□□□ -1.27
MBD4O95243 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.15□□□□□ -1.27
MBD4O95243 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.15□□□□□ -1.27
MBD4O95243 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
MBD4O95243 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.15□□□□□ -1.27
MBD4O95243 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
MBD4O95243 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
MBD4O95243 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
MBD4O95243 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.14□□□□□ -1.27
MBD4O95243 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 RNA5SP211-201ENST00000365516 117 ntBASIC7.14□□□□□ -1.27
MBD4O95243 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.14□□□□□ -1.27
MBD4O95243 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.14□□□□□ -1.27
MBD4O95243 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.14□□□□□ -1.27
MBD4O95243 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.14□□□□□ -1.27
MBD4O95243 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.14□□□□□ -1.27
MBD4O95243 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.14□□□□□ -1.27
MBD4O95243 ACA64.4-201ENST00000459070 127 ntBASIC7.14□□□□□ -1.27
MBD4O95243 TRBV8-1-201ENST00000481590 279 ntBASIC7.14□□□□□ -1.27
MBD4O95243 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 CYP4F27P-201ENST00000514557 494 ntBASIC7.14□□□□□ -1.27
MBD4O95243 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.14□□□□□ -1.27
MBD4O95243 PCNAP4-201ENST00000532690 730 ntBASIC7.14□□□□□ -1.27
MBD4O95243 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.14□□□□□ -1.27
MBD4O95243 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.14□□□□□ -1.27
MBD4O95243 TRAV11-201ENST00000539512 339 ntBASIC7.14□□□□□ -1.27
MBD4O95243 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.14□□□□□ -1.27
MBD4O95243 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.14□□□□□ -1.27
MBD4O95243 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.14□□□□□ -1.27
MBD4O95243 AC006530.1-201ENST00000555980 571 ntBASIC7.14□□□□□ -1.27
MBD4O95243 AC034229.2-201ENST00000566945 2508 ntBASIC7.14□□□□□ -1.27
MBD4O95243 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.14□□□□□ -1.27
MBD4O95243 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
MBD4O95243 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.14□□□□□ -1.27
MBD4O95243 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.14□□□□□ -1.27
MBD4O95243 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MBD4O95243 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
MBD4O95243 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 ICE2P1-201ENST00000512800 1849 ntBASIC7.13□□□□□ -1.27
MBD4O95243 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 RN7SKP128-201ENST00000364270 303 ntBASIC7.13□□□□□ -1.27
MBD4O95243 SNORA70H-201ENST00000383910 135 ntBASIC7.13□□□□□ -1.27
MBD4O95243 SNORA70J-201ENST00000384182 135 ntBASIC7.13□□□□□ -1.27
MBD4O95243 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
MBD4O95243 AL360271.1-201ENST00000395679 510 ntBASIC7.13□□□□□ -1.27
MBD4O95243 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.13□□□□□ -1.27
MBD4O95243 AC099677.3-201ENST00000427081 395 ntBASIC7.13□□□□□ -1.27
MBD4O95243 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.13□□□□□ -1.27
MBD4O95243 AL389925.1-201ENST00000432257 728 ntBASIC7.13□□□□□ -1.27
MBD4O95243 AC073109.1-201ENST00000445066 978 ntBASIC7.13□□□□□ -1.27
MBD4O95243 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.13□□□□□ -1.27
MBD4O95243 AL162739.1-201ENST00000450606 307 ntBASIC7.13□□□□□ -1.27
MBD4O95243 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.13□□□□□ -1.27
MBD4O95243 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.13□□□□□ -1.27
MBD4O95243 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 AL122020.1-201ENST00000472287 459 ntBASIC7.13□□□□□ -1.27
MBD4O95243 UBFD1P1-201ENST00000473259 814 ntBASIC7.13□□□□□ -1.27
MBD4O95243 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 OR5D2P-201ENST00000524390 911 ntBASIC7.13□□□□□ -1.27
MBD4O95243 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.13□□□□□ -1.27
MBD4O95243 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.13□□□□□ -1.27
MBD4O95243 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.13□□□□□ -1.27
MBD4O95243 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.13□□□□□ -1.27
MBD4O95243 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.13□□□□□ -1.27
MBD4O95243 RPL12P48-201ENST00000605620 304 ntBASIC7.13□□□□□ -1.27
MBD4O95243 AP005431.1-201ENST00000618479 319 ntBASIC7.13□□□□□ -1.27
MBD4O95243 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MBD4O95243 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.13□□□□□ -1.27
MBD4O95243 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 384.8 ms