Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 MTND6P21-201ENST00000443620 482 ntBASIC8.66□□□□□ -1.02
RNF40O75150 TXNP3-201ENST00000454560 301 ntBASIC8.66□□□□□ -1.02
RNF40O75150 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.66□□□□□ -1.02
RNF40O75150 RN7SL508P-201ENST00000464472 303 ntBASIC8.66□□□□□ -1.02
RNF40O75150 AC026254.1-201ENST00000479473 431 ntBASIC8.66□□□□□ -1.02
RNF40O75150 RN7SL403P-201ENST00000481783 305 ntBASIC8.66□□□□□ -1.02
RNF40O75150 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.66□□□□□ -1.02
RNF40O75150 AC090835.1-201ENST00000515189 1024 ntBASIC8.66□□□□□ -1.02
RNF40O75150 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 ZNF705CP-201ENST00000530515 889 ntBASIC8.66□□□□□ -1.02
RNF40O75150 YWHABP2-201ENST00000540201 713 ntBASIC8.66□□□□□ -1.02
RNF40O75150 EIF4A1P4-201ENST00000550578 1213 ntBASIC8.66□□□□□ -1.02
RNF40O75150 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.66□□□□□ -1.02
RNF40O75150 AL355375.2-201ENST00000574825 175 ntBASIC8.66□□□□□ -1.02
RNF40O75150 RN7SL311P-201ENST00000579858 306 ntBASIC8.66□□□□□ -1.02
RNF40O75150 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 VN1R80P-201ENST00000597126 338 ntBASIC8.66□□□□□ -1.02
RNF40O75150 AP001506.1-201ENST00000615444 211 ntBASIC8.66□□□□□ -1.02
RNF40O75150 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
RNF40O75150 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 AC007342.7-201ENST00000624610 2337 ntBASIC8.66□□□□□ -1.02
RNF40O75150 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 RN7SKP23-201ENST00000625159 4301 ntBASIC8.66□□□□□ -1.02
RNF40O75150 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
RNF40O75150 MTND5P3-201ENST00000438536 1800 ntBASIC8.66□□□□□ -1.02
RNF40O75150 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 AC084782.1-201ENST00000564401 2465 ntBASIC8.65□□□□□ -1.02
RNF40O75150 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.65□□□□□ -1.02
RNF40O75150 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
RNF40O75150 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC8.65□□□□□ -1.02
RNF40O75150 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
RNF40O75150 WASF4P-201ENST00000444248 1494 ntBASIC8.65□□□□□ -1.02
RNF40O75150 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 COL6A4P1-202ENST00000487147 4317 ntBASIC8.65□□□□□ -1.02
RNF40O75150 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
RNF40O75150 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 AC096745.2-201ENST00000627783 1914 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AL138847.1-201ENST00000258651 546 ntBASIC8.65□□□□□ -1.02
RNF40O75150 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RNF40O75150 RPL11P4-201ENST00000332269 436 ntBASIC8.65□□□□□ -1.02
RNF40O75150 Y_RNA.146-201ENST00000363549 102 ntBASIC8.65□□□□□ -1.02
RNF40O75150 RNU6-767P-201ENST00000384132 107 ntBASIC8.65□□□□□ -1.02
RNF40O75150 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RNF40O75150 RPL5P35-201ENST00000398869 816 ntBASIC8.65□□□□□ -1.02
RNF40O75150 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
RNF40O75150 MTCYBP36-201ENST00000404146 440 ntBASIC8.65□□□□□ -1.02
RNF40O75150 LARP1P1-201ENST00000407692 292 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC8.65□□□□□ -1.02
RNF40O75150 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.65□□□□□ -1.02
RNF40O75150 LDHAP2-201ENST00000437325 985 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC8.65□□□□□ -1.02
RNF40O75150 CALM1P1-201ENST00000442082 433 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.65□□□□□ -1.02
RNF40O75150 AC140076.1-201ENST00000449897 361 ntBASIC8.65□□□□□ -1.02
RNF40O75150 EIF3LP2-201ENST00000457262 807 ntBASIC8.65□□□□□ -1.02
RNF40O75150 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.65□□□□□ -1.02
RNF40O75150 AC104108.1-201ENST00000509930 412 ntBASIC8.65□□□□□ -1.02
RNF40O75150 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.65□□□□□ -1.02
RNF40O75150 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC8.65□□□□□ -1.02
RNF40O75150 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC8.65□□□□□ -1.02
RNF40O75150 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.65□□□□□ -1.02
RNF40O75150 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.65□□□□□ -1.02
RNF40O75150 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.65□□□□□ -1.02
RNF40O75150 AC136944.5-201ENST00000573021 151 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC011444.4-201ENST00000586415 418 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.65□□□□□ -1.02
RNF40O75150 NRBF2P5-201ENST00000603087 788 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC007262.1-201ENST00000604099 321 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AL358335.3-201ENST00000604678 327 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC103710.1-201ENST00000610003 901 ntBASIC8.65□□□□□ -1.02
RNF40O75150 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 MIR6726-201ENST00000613751 61 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC243830.3-201ENST00000616810 376 ntBASIC8.65□□□□□ -1.02
RNF40O75150 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RNF40O75150 AC005858.4-201ENST00000623191 700 ntBASIC8.65□□□□□ -1.02
RNF40O75150 AC114546.4-201ENST00000624413 369 ntBASIC8.65□□□□□ -1.02
RNF40O75150 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.65□□□□□ -1.02
RNF40O75150 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms