Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC018639.1-201ENST00000492994 442 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 MRPL49P1-201ENST00000505951 535 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC100823.2-201ENST00000518337 699 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 IGKV3-34-201ENST00000521692 293 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AK6P1-201ENST00000540219 478 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 OR6C73P-201ENST00000546432 358 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
HOXA2O43364 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 DNM1P31-201ENST00000564149 696 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 MIR4795-201ENST00000584182 89 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AC010928.3-201ENST00000587712 541 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC008385.1-201ENST00000604421 355 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AL161729.4-201ENST00000604650 476 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 AC023206.1-201ENST00000605824 298 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 MIR7162-201ENST00000611134 69 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
HOXA2O43364 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 CASC19-243ENST00000641588 1546 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 AC012078.1-201ENST00000405035 1646 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
HOXA2O43364 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.42□□□□□ -1.06
HOXA2O43364 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.42□□□□□ -1.06
HOXA2O43364 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.42□□□□□ -1.06
HOXA2O43364 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.42□□□□□ -1.06
HOXA2O43364 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
HOXA2O43364 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
HOXA2O43364 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
HOXA2O43364 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.41□□□□□ -1.06
HOXA2O43364 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 AL157713.1-201ENST00000379752 1531 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 TRIM60P14-201ENST00000513444 1419 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 RARSP1-201ENST00000542842 1418 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.41□□□□□ -1.06
HOXA2O43364 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 MTCO1P6-201ENST00000481192 1384 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
HOXA2O43364 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 H2AFZP3-201ENST00000394213 387 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 GLRX3P2-201ENST00000405027 1038 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 AL354751.2-201ENST00000415471 210 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 MTCO1P20-201ENST00000425366 358 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXA2O43364 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXA2O43364 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.41□□□□□ -1.06
HOXA2O43364 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXA2O43364 AL161454.1-201ENST00000446226 569 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 RAD23BP3-201ENST00000454157 1152 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 RANP1-206ENST00000455094 651 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 RN7SL335P-201ENST00000482790 304 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 AC122714.1-201ENST00000502510 459 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 MTCO2P4-201ENST00000517968 247 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXA2O43364 AF235103.2-201ENST00000525753 346 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 AP003072.1-201ENST00000531740 145 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 AC137768.1-201ENST00000549998 553 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 GTF2IP8-201ENST00000560687 584 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 RN7SL473P-201ENST00000580341 299 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXA2O43364 EXOSC3P2-201ENST00000594464 497 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 BNIP3P4-201ENST00000604946 565 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 AP000648.2-201ENST00000624182 404 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms