Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
SDCBPO00560 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SDCBPO00560 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
SDCBPO00560 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 RN7SKP250-201ENST00000363924 321 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 AC121334.1-201ENST00000396414 802 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 YWHAZP6-201ENST00000399764 738 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 SNRPEP6-201ENST00000407465 277 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.96□□□□□ -1.62
SDCBPO00560 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC4.96□□□□□ -1.62
SDCBPO00560 BX276092.6-201ENST00000430476 250 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC108479.1-201ENST00000431142 427 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC138761.5-201ENST00000433967 325 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 FTLP8-201ENST00000446770 267 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 REG1CP-206ENST00000447469 496 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 BX276092.8-201ENST00000455722 250 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 SNRPCP3-201ENST00000474888 476 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.96□□□□□ -1.62
SDCBPO00560 RPL38P3-201ENST00000484463 213 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.96□□□□□ -1.62
SDCBPO00560 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.96□□□□□ -1.62
SDCBPO00560 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.96□□□□□ -1.62
SDCBPO00560 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.96□□□□□ -1.62
SDCBPO00560 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.96□□□□□ -1.62
SDCBPO00560 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.96□□□□□ -1.62
SDCBPO00560 ZNF322P1-201ENST00000568013 1209 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC007346.1-201ENST00000569208 867 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC004232.2-201ENST00000574245 821 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.96□□□□□ -1.62
SDCBPO00560 AC011500.1-201ENST00000601963 469 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC073333.2-201ENST00000603589 769 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC005828.7-201ENST00000607331 556 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AC096861.1-201ENST00000616652 240 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AL512652.1-201ENST00000619006 500 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 FAM27E2-201ENST00000619668 403 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.96□□□□□ -1.62
SDCBPO00560 AL357140.4-201ENST00000636827 412 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 GVINP1-202ENST00000531871 7271 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SDCBPO00560 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.96□□□□□ -1.62
SDCBPO00560 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.96□□□□□ -1.62
SDCBPO00560 AL158152.1-201ENST00000602652 1435 ntBASIC4.96□□□□□ -1.62
SDCBPO00560 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SDCBPO00560 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SDCBPO00560 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC4.95□□□□□ -1.62
SDCBPO00560 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.95□□□□□ -1.62
SDCBPO00560 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.95□□□□□ -1.62
SDCBPO00560 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SDCBPO00560 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.95□□□□□ -1.62
SDCBPO00560 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 RNA5SP198-201ENST00000410376 127 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.95□□□□□ -1.62
SDCBPO00560 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 THEM7P-201ENST00000419556 672 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.95□□□□□ -1.62
SDCBPO00560 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 AK3P5-201ENST00000432033 519 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC242426.1-201ENST00000435270 960 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SDCBPO00560 AC096632.2-201ENST00000438139 1239 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AL663074.2-201ENST00000440621 479 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 TRIM60P16-201ENST00000444048 694 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC104164.1-201ENST00000460282 590 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC108751.3-201ENST00000461814 1020 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC112484.3-201ENST00000505910 329 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.95□□□□□ -1.62
SDCBPO00560 MIR2117-201ENST00000516780 80 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.95□□□□□ -1.62
SDCBPO00560 OR7E158P-201ENST00000524483 910 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 AP003033.2-201ENST00000528901 805 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 OR4A41P-201ENST00000533053 928 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.95□□□□□ -1.62
SDCBPO00560 AC121758.1-202ENST00000556917 658 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.95□□□□□ -1.62
SDCBPO00560 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.95□□□□□ -1.62
SDCBPO00560 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.95□□□□□ -1.62
SDCBPO00560 SMIM12P1-201ENST00000603004 274 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC073389.3-201ENST00000609434 935 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AL080312.2-201ENST00000613001 630 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 RNA5SP439-201ENST00000617595 124 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC073488.6-201ENST00000632293 754 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms