Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC66A2RUB6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC66A2RUB6 AC103564.3-201ENST00000621194 220 ntBASIC7.06□□□□□ -1.28
CCDC66A2RUB6 AC008626.2-201ENST00000624425 248 ntBASIC7.06□□□□□ -1.28
CCDC66A2RUB6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC66A2RUB6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC66A2RUB6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC66A2RUB6 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.06□□□□□ -1.28
CCDC66A2RUB6 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
CCDC66A2RUB6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC66A2RUB6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AP005435.3-201ENST00000531260 3198 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ZNF101P1-201ENST00000435701 1720 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 RNU1-55P-201ENST00000365510 158 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 MIR431-201ENST00000385266 114 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 RPL23AP17-201ENST00000401064 499 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ZNF602P-201ENST00000405929 924 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 GAPDHP57-201ENST00000424400 585 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 MTND2P5-201ENST00000432656 1006 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC092447.2-201ENST00000435487 669 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 MTCYBP31-201ENST00000438855 1122 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 RPS19P6-201ENST00000441327 433 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 BUD31P2-201ENST00000449374 300 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC005517.1-201ENST00000452091 489 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 SRP68P2-201ENST00000456184 254 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AL096803.1-201ENST00000456921 1021 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 PPP1R2P6-201ENST00000478565 588 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC073648.3-201ENST00000504939 925 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC017007.1-201ENST00000511960 415 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 IGKV1D-32-201ENST00000517449 318 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 DHFRP1-201ENST00000579682 559 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AP001357.1-201ENST00000586304 1053 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC097467.4-201ENST00000605504 141 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AL161931.1-201ENST00000612768 246 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC090617.9-201ENST00000623751 147 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC125336.1-201ENST00000508893 2827 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AL157831.2-201ENST00000564681 3095 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC090220.1-201ENST00000593078 1699 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 PPBPP2-201ENST00000513150 1362 ntBASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CCDC66A2RUB6 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 FBXL21-201ENST00000297158 1305 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 GNG5P2-201ENST00000372054 207 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 RNU6-354P-201ENST00000383862 107 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 RNU6-610P-201ENST00000384264 107 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 RNY3P9-201ENST00000384727 106 ntBASIC7.04□□□□□ -1.28
CCDC66A2RUB6 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC66A2RUB6 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms