Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 TCF3P1-201ENST00000423021 1937 ntBASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 AC073210.2-201ENST00000430369 194 ntBASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 AC097658.1-201ENST00000475555 843 ntBASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 AL138781.1-201ENST00000566567 1274 ntBASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DRB4X5D2U9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 AC142086.2-201ENST00000569753 217 ntBASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 MYC-209ENST00000641252 345 ntBASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 AC133041.1-202ENST00000642053 222 ntBASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DRB4X5D2U9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms