Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 KRT8P20-201ENST00000423953 1409 ntBASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 AL023875.1-201ENST00000640777 796 ntBASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 MIR718-201ENST00000390190 70 ntBASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 AL390719.1-204ENST00000412397 1219 ntBASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 SNORA78-201ENST00000459373 127 ntBASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HRH3Q9Y5N1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 AC124016.1-201ENST00000609552 612 ntBASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
HRH3Q9Y5N1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms