Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MRPS28Q9Y2Q9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 KRT18P68-201ENST00000392293 1000 ntBASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 AC034268.1-201ENST00000441047 882 ntBASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 AL032819.2-201ENST00000624543 2162 ntBASIC16.94■□□□□ 0.3
MRPS28Q9Y2Q9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 AC137761.2-201ENST00000561729 223 ntBASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 AC145350.3-201ENST00000569033 163 ntBASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MRPS28Q9Y2Q9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
MRPS28Q9Y2Q9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms