Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 AC124283.5-201ENST00000624661 1809 ntBASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA1Q9UND3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NPIPA1Q9UND3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 AC211429.1-201ENST00000415277 523 ntBASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 RARRES2P10-201ENST00000564312 460 ntBASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA1Q9UND3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AL512408.1-201ENST00000569378 2000 ntBASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms