Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00474Q9P2X8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00474Q9P2X8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00474Q9P2X8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00474Q9P2X8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00474Q9P2X8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00474Q9P2X8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 KRT8P17-201ENST00000453110 1448 ntBASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 LINC01521-201ENST00000504184 1943 ntBASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00474Q9P2X8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 AC106820.2-201ENST00000563775 3264 ntBASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 AC060766.5-201ENST00000590539 871 ntBASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 AC120498.9-201ENST00000339021 3867 ntBASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00474Q9P2X8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms