Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.92■□□□□ 0.78
HACD3Q9P035 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 TMEM179-206ENST00000616017 1645 ntBASIC19.92■□□□□ 0.78
HACD3Q9P035 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.92■□□□□ 0.78
HACD3Q9P035 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.92■□□□□ 0.78
HACD3Q9P035 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.92■□□□□ 0.78
HACD3Q9P035 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.92■□□□□ 0.78
HACD3Q9P035 UNC93B5-201ENST00000530315 699 ntBASIC19.92■□□□□ 0.78
HACD3Q9P035 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 SOX15-203ENST00000570788 1093 ntBASIC19.92■□□□□ 0.78
HACD3Q9P035 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.92■□□□□ 0.78
HACD3Q9P035 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.92■□□□□ 0.78
HACD3Q9P035 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.92■□□□□ 0.78
HACD3Q9P035 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.92■□□□□ 0.78
HACD3Q9P035 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HACD3Q9P035 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HACD3Q9P035 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
HACD3Q9P035 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HACD3Q9P035 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.92■□□□□ 0.78
HACD3Q9P035 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HACD3Q9P035 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.92■□□□□ 0.78
HACD3Q9P035 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.92■□□□□ 0.78
HACD3Q9P035 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HACD3Q9P035 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
HACD3Q9P035 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.91■□□□□ 0.78
HACD3Q9P035 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
HACD3Q9P035 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.91■□□□□ 0.78
HACD3Q9P035 RNA5SP413-201ENST00000516373 109 ntBASIC19.91■□□□□ 0.78
HACD3Q9P035 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HACD3Q9P035 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.91■□□□□ 0.78
HACD3Q9P035 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.91■□□□□ 0.78
HACD3Q9P035 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.91■□□□□ 0.78
HACD3Q9P035 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HACD3Q9P035 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
HACD3Q9P035 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.91■□□□□ 0.78
HACD3Q9P035 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HACD3Q9P035 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.9■□□□□ 0.78
HACD3Q9P035 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.9■□□□□ 0.78
HACD3Q9P035 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HACD3Q9P035 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.9■□□□□ 0.78
HACD3Q9P035 UNC93B4-201ENST00000505679 747 ntBASIC19.9■□□□□ 0.78
HACD3Q9P035 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.9■□□□□ 0.78
HACD3Q9P035 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.9■□□□□ 0.78
HACD3Q9P035 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.9■□□□□ 0.78
HACD3Q9P035 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.9■□□□□ 0.78
HACD3Q9P035 AC120498.8-201ENST00000614275 531 ntBASIC19.9■□□□□ 0.78
HACD3Q9P035 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HACD3Q9P035 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.9■□□□□ 0.78
HACD3Q9P035 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
HACD3Q9P035 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HACD3Q9P035 AC112907.3-201ENST00000577781 2400 ntBASIC19.9■□□□□ 0.78
HACD3Q9P035 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HACD3Q9P035 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.89■□□□□ 0.77
HACD3Q9P035 RPS2P52-201ENST00000469610 820 ntBASIC19.89■□□□□ 0.77
HACD3Q9P035 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.89■□□□□ 0.77
HACD3Q9P035 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.89■□□□□ 0.77
HACD3Q9P035 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HACD3Q9P035 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.89■□□□□ 0.77
HACD3Q9P035 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.89■□□□□ 0.77
HACD3Q9P035 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HACD3Q9P035 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HACD3Q9P035 AC008687.6-201ENST00000596318 630 ntBASIC19.89■□□□□ 0.77
HACD3Q9P035 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HACD3Q9P035 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms