Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRTM1Q9HBL6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRTM1Q9HBL6 Z82202.1-201ENST00000623446 1880 ntBASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 AC092437.1-201ENST00000624794 1048 ntBASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 AC073111.5-205ENST00000641717 521 ntBASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 AC098818.2-201ENST00000564925 2320 ntBASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRTM1Q9HBL6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 MKRN4P-201ENST00000444706 1521 ntBASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 GPX1P1-201ENST00000388829 606 ntBASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRTM1Q9HBL6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 AP000974.1-201ENST00000623909 2387 ntBASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 AC105036.2-201ENST00000569468 176 ntBASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 AL137784.2-201ENST00000607332 1000 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms