Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH11XQ9BZA7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 AC091390.4-202ENST00000476426 537 ntBASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 AC010653.2-201ENST00000623505 997 ntBASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 AC133561.1-201ENST00000568600 2415 ntBASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH11XQ9BZA7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 AC139887.4-201ENST00000607877 719 ntBASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 AL358472.4-201ENST00000633140 710 ntBASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 AC079834.2-201ENST00000609776 1949 ntBASIC25.65■■□□□ 1.7
PCDH11XQ9BZA7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 AC007663.1-201ENST00000438948 1240 ntBASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 AC091076.1-201ENST00000610741 619 ntBASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH11XQ9BZA7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
PCDH11XQ9BZA7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 RNF152P1-201ENST00000397754 604 ntBASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 AC092338.2-201ENST00000568827 1415 ntBASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms