Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 HLA-G-202ENST00000376815 851 ntBASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 HLA-G-203ENST00000376818 1127 ntBASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 KRT16P5-201ENST00000455284 522 ntBASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 REXO1L10P-201ENST00000615707 1290 ntBASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 AL121906.2-201ENST00000621597 723 ntBASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 AC099778.1-201ENST00000568593 1911 ntBASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CYP2D8P-201ENST00000433633 1490 ntBASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC6.71□□□□□ -1.34
KRTAP4-3Q9BYR4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 TFP1-202ENST00000475455 1573 ntBASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 RBM17P1-201ENST00000453646 1190 ntBASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
KRTAP4-3Q9BYR4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms