Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL25A1Q9BXS0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL25A1Q9BXS0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 RPSAP43-201ENST00000402237 625 ntBASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 TP73-AS1-207ENST00000624167 988 ntBASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL25A1Q9BXS0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 AP006587.1-201ENST00000534129 1502 ntBASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 CA15P1-201ENST00000481698 905 ntBASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 AC138894.3-201ENST00000603787 634 ntBASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.13■□□□□ 0.81
COL25A1Q9BXS0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 AC004812.2-201ENST00000611079 2094 ntBASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 AL031284.1-201ENST00000419297 478 ntBASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 RPL13AP23-201ENST00000480739 586 ntBASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.12■□□□□ 0.81
COL25A1Q9BXS0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 AC004967.1-201ENST00000453589 447 ntBASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 CYMP-203ENST00000474680 1263 ntBASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 AC139530.1-201ENST00000575312 1977 ntBASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL25A1Q9BXS0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 AC243591.1-201ENST00000452967 1364 ntBASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 GPX1P2-201ENST00000429271 606 ntBASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 TOB2P1-201ENST00000469761 992 ntBASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 AC104819.1-201ENST00000504587 486 ntBASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms