Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 AC087499.1-201ENST00000418141 1075 ntBASIC24■■□□□ 1.43
RPAP1Q9BWH6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24■■□□□ 1.43
RPAP1Q9BWH6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RPAP1Q9BWH6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 AL031963.3-201ENST00000606441 850 ntBASIC24■■□□□ 1.43
RPAP1Q9BWH6 Six3os1_6.1-201ENST00000620790 196 ntBASIC24■■□□□ 1.43
RPAP1Q9BWH6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24■■□□□ 1.43
RPAP1Q9BWH6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24■■□□□ 1.43
RPAP1Q9BWH6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC24■■□□□ 1.43
RPAP1Q9BWH6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 AC012306.2-201ENST00000609350 630 ntBASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RPAP1Q9BWH6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 AC097493.4-201ENST00000641197 219 ntBASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RPAP1Q9BWH6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 AC007952.6-201ENST00000573168 2673 ntBASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 AC003957.1-201ENST00000625108 2673 ntBASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 KRT8P20-201ENST00000423953 1409 ntBASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.97■■□□□ 1.43
RPAP1Q9BWH6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 HLA-G-202ENST00000376815 851 ntBASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 HLA-G-203ENST00000376818 1127 ntBASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.96■■□□□ 1.43
RPAP1Q9BWH6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.95■■□□□ 1.43
RPAP1Q9BWH6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
RPAP1Q9BWH6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RPAP1Q9BWH6 BX119927.1-201ENST00000636596 1552 ntBASIC23.95■■□□□ 1.43
RPAP1Q9BWH6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.95■■□□□ 1.43
RPAP1Q9BWH6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 TSPY15P-201ENST00000457163 923 ntBASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 AL121906.2-201ENST00000621597 723 ntBASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms