Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 AC133041.1-202ENST00000642053 222 ntBASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF4Q9BSR8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF4Q9BSR8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF4Q9BSR8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF4Q9BSR8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
YIPF4Q9BSR8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
YIPF4Q9BSR8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF4Q9BSR8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 FAM201B-201ENST00000458407 597 ntBASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 AC091874.3-201ENST00000512672 1195 ntBASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 AC098934.4-201ENST00000564127 592 ntBASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF4Q9BSR8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 AC116562.4-201ENST00000641316 2276 ntBASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 AC069152.1-201ENST00000438030 544 ntBASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 AC092118.2-201ENST00000613495 667 ntBASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 AC007952.6-201ENST00000573168 2673 ntBASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 AC003957.1-201ENST00000625108 2673 ntBASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
YIPF4Q9BSR8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 PHGDH-210ENST00000641115 1638 ntBASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 AC009237.14-201ENST00000609975 1594 ntBASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
YIPF4Q9BSR8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms