Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SMR3AQ99954 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMR3AQ99954 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMR3AQ99954 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
SMR3AQ99954 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMR3AQ99954 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMR3AQ99954 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.1■□□□□ 0.17
SMR3AQ99954 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.1■□□□□ 0.17
SMR3AQ99954 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.1■□□□□ 0.17
SMR3AQ99954 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.1■□□□□ 0.17
SMR3AQ99954 AL512604.3-201ENST00000569583 964 ntBASIC16.1■□□□□ 0.17
SMR3AQ99954 AC111152.3-201ENST00000569699 673 ntBASIC16.1■□□□□ 0.17
SMR3AQ99954 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.1■□□□□ 0.17
SMR3AQ99954 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMR3AQ99954 HLA-A-209ENST00000638375 975 ntBASIC16.1■□□□□ 0.17
SMR3AQ99954 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMR3AQ99954 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.1■□□□□ 0.17
SMR3AQ99954 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SMR3AQ99954 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMR3AQ99954 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SMR3AQ99954 LINC01311-201ENST00000565162 1445 ntBASIC16.1■□□□□ 0.17
SMR3AQ99954 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMR3AQ99954 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.09■□□□□ 0.17
SMR3AQ99954 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.09■□□□□ 0.17
SMR3AQ99954 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SMR3AQ99954 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.09■□□□□ 0.17
SMR3AQ99954 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SMR3AQ99954 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.09■□□□□ 0.17
SMR3AQ99954 HYMAI.1-201ENST00000620949 238 ntBASIC16.09■□□□□ 0.17
SMR3AQ99954 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SMR3AQ99954 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMR3AQ99954 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMR3AQ99954 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMR3AQ99954 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.08■□□□□ 0.16
SMR3AQ99954 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.08■□□□□ 0.16
SMR3AQ99954 AC092329.2-201ENST00000598402 547 ntBASIC16.08■□□□□ 0.16
SMR3AQ99954 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.08■□□□□ 0.16
SMR3AQ99954 KRT8P17-201ENST00000453110 1448 ntBASIC16.08■□□□□ 0.16
SMR3AQ99954 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.08■□□□□ 0.16
SMR3AQ99954 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.08■□□□□ 0.16
SMR3AQ99954 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMR3AQ99954 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.08■□□□□ 0.16
SMR3AQ99954 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.07■□□□□ 0.16
SMR3AQ99954 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.07■□□□□ 0.16
SMR3AQ99954 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.07■□□□□ 0.16
SMR3AQ99954 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.07■□□□□ 0.16
SMR3AQ99954 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.07■□□□□ 0.16
SMR3AQ99954 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMR3AQ99954 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.07■□□□□ 0.16
SMR3AQ99954 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMR3AQ99954 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.07■□□□□ 0.16
SMR3AQ99954 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.07■□□□□ 0.16
SMR3AQ99954 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMR3AQ99954 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMR3AQ99954 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.06■□□□□ 0.16
SMR3AQ99954 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms