Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 DUX4L16-201ENST00000555130 1264 ntBASIC17.9■□□□□ 0.46
SNX18Q96RF0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX18Q96RF0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SNX18Q96RF0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNX18Q96RF0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.89■□□□□ 0.45
SNX18Q96RF0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 AL355802.2-201ENST00000402069 882 ntBASIC17.89■□□□□ 0.45
SNX18Q96RF0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX18Q96RF0 CNN2P6-201ENST00000439038 900 ntBASIC17.89■□□□□ 0.45
SNX18Q96RF0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SNX18Q96RF0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.89■□□□□ 0.45
SNX18Q96RF0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.89■□□□□ 0.45
SNX18Q96RF0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 AC104771.1-201ENST00000603335 964 ntBASIC17.89■□□□□ 0.45
SNX18Q96RF0 AL109923.1-201ENST00000618799 583 ntBASIC17.89■□□□□ 0.45
SNX18Q96RF0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX18Q96RF0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.89■□□□□ 0.45
SNX18Q96RF0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX18Q96RF0 AC068338.2-201ENST00000563278 1430 ntBASIC17.89■□□□□ 0.45
SNX18Q96RF0 PTBP1P-201ENST00000554374 1601 ntBASIC17.88■□□□□ 0.45
SNX18Q96RF0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.88■□□□□ 0.45
SNX18Q96RF0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.88■□□□□ 0.45
SNX18Q96RF0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX18Q96RF0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SNX18Q96RF0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 AC105020.6-201ENST00000621523 1217 ntBASIC17.87■□□□□ 0.45
SNX18Q96RF0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 AC005332.8-201ENST00000622750 2735 ntBASIC17.87■□□□□ 0.45
SNX18Q96RF0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX18Q96RF0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.87■□□□□ 0.45
SNX18Q96RF0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.87■□□□□ 0.45
SNX18Q96RF0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX18Q96RF0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms