Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.37■■□□□ 1.49
RPGRQ92834 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.36■■□□□ 1.49
RPGRQ92834 MFAP1P1-201ENST00000442257 1255 ntBASIC24.36■■□□□ 1.49
RPGRQ92834 AC008040.2-201ENST00000461049 708 ntBASIC24.36■■□□□ 1.49
RPGRQ92834 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.36■■□□□ 1.49
RPGRQ92834 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.36■■□□□ 1.49
RPGRQ92834 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.36■■□□□ 1.49
RPGRQ92834 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.36■■□□□ 1.49
RPGRQ92834 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.36■■□□□ 1.49
RPGRQ92834 AC116562.4-202ENST00000641738 218 ntBASIC24.36■■□□□ 1.49
RPGRQ92834 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
RPGRQ92834 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPGRQ92834 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.36■■□□□ 1.49
RPGRQ92834 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RPGRQ92834 FAM207BP-201ENST00000447172 505 ntBASIC24.35■■□□□ 1.49
RPGRQ92834 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.35■■□□□ 1.49
RPGRQ92834 AC063952.2-201ENST00000498792 1227 ntBASIC24.35■■□□□ 1.49
RPGRQ92834 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.35■■□□□ 1.49
RPGRQ92834 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
RPGRQ92834 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RPGRQ92834 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RPGRQ92834 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RPGRQ92834 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RPGRQ92834 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.34■■□□□ 1.49
RPGRQ92834 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPGRQ92834 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RPGRQ92834 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPGRQ92834 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPGRQ92834 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RPGRQ92834 AC012676.1-201ENST00000574705 1949 ntBASIC24.34■■□□□ 1.49
RPGRQ92834 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RPGRQ92834 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.34■■□□□ 1.49
RPGRQ92834 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPGRQ92834 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.34■■□□□ 1.49
RPGRQ92834 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
RPGRQ92834 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
RPGRQ92834 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.34■■□□□ 1.49
RPGRQ92834 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPGRQ92834 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.34■■□□□ 1.49
RPGRQ92834 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RPGRQ92834 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RPGRQ92834 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.33■■□□□ 1.49
RPGRQ92834 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.33■■□□□ 1.49
RPGRQ92834 AC117947.1-201ENST00000427448 529 ntBASIC24.33■■□□□ 1.49
RPGRQ92834 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.33■■□□□ 1.49
RPGRQ92834 CCR12P-201ENST00000446203 998 ntBASIC24.33■■□□□ 1.49
RPGRQ92834 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.33■■□□□ 1.49
RPGRQ92834 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.33■■□□□ 1.49
RPGRQ92834 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.33■■□□□ 1.49
RPGRQ92834 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC24.33■■□□□ 1.49
RPGRQ92834 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RPGRQ92834 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
RPGRQ92834 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
RPGRQ92834 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
RPGRQ92834 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPGRQ92834 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPGRQ92834 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPGRQ92834 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RPGRQ92834 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RPGRQ92834 AC096733.2-201ENST00000609937 1394 ntBASIC24.32■■□□□ 1.48
RPGRQ92834 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RPGRQ92834 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.32■■□□□ 1.48
RPGRQ92834 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
RPGRQ92834 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPGRQ92834 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.32■■□□□ 1.48
RPGRQ92834 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.32■■□□□ 1.48
RPGRQ92834 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.32■■□□□ 1.48
RPGRQ92834 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPGRQ92834 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPGRQ92834 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.32■■□□□ 1.48
RPGRQ92834 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.31■■□□□ 1.48
RPGRQ92834 AC133561.1-201ENST00000568600 2415 ntBASIC24.31■■□□□ 1.48
RPGRQ92834 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.31■■□□□ 1.48
RPGRQ92834 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
RPGRQ92834 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.31■■□□□ 1.48
RPGRQ92834 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RPGRQ92834 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.31■■□□□ 1.48
RPGRQ92834 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RPGRQ92834 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RPGRQ92834 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RPGRQ92834 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.31■■□□□ 1.48
RPGRQ92834 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RPGRQ92834 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
RPGRQ92834 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms